| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| transcription-repair coupling factor | similarity |
KEGG
DB: KEGG |
38.9 | 999.99 | 672 | 2.30e-190 | puf:UFO1_0468 |
| Transcription-repair coupling factor n=6 Tax=Pelosinus fermentans RepID=I8RUU3_9FIRM rbh | similarity |
UNIREF
DB: UNIREF90 |
38.0 | 0.0 | 667 | 8.00e+00 | puf:UFO1_0468 |
| no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=133 to=222 evalue=1.2e-09) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 1.00e+00 | puf:UFO1_0468 |
| P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=470 to=760 evalue=1.0e-66) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | puf:UFO1_0468 |
| TRCF domain-like (db=superfamily db_id=SSF143517 from=912 to=1067 evalue=1.4e-27) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | puf:UFO1_0468 |
| CarD-like (db=superfamily db_id=SSF141259 from=391 to=470 evalue=9.0e-23 interpro_id=IPR003711 interpro_description=CarD-like/TRCF domain) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 9.00e+00 | puf:UFO1_0468 |
| (db=HMMPfam db_id=PF02559 from=402 to=498 evalue=3.2e-28 interpro_id=IPR003711 interpro_description=CarD-like/TRCF domain) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | puf:UFO1_0468 |
| (db=HMMPfam db_id=PF03461 from=927 to=1004 evalue=3.8e-21 interpro_id=IPR005118 interpro_description=Transcription-repair-coupling factor domain GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | puf:UFO1_0468 |
| (db=HMMPfam db_id=PF00270 from=528 to=686 evalue=4.7e-19 interpro_id=IPR011545 interpro_description=DNA/RNA helicase, DEAD/DEAH box type, N-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: ATP binding (GO:0005524), Molecular Function: ATP-dependent helicase activity (GO:0008026)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 4.00e+00 | puf:UFO1_0468 |
| (db=HMMPfam db_id=PF00271 from=761 to=831 evalue=1.4e-11 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | puf:UFO1_0468 |
| DEAD BOX ATP-DEPENDENT RNA HELICASE (db=HMMPanther db_id=PTHR10967 from=472 to=1060 evalue=0.00091) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 0.0 | puf:UFO1_0468 |
| mfd: transcription-repair coupling factor (db=HMMTigr db_id=TIGR00580 from=152 to=1001 evalue=0.0 interpro_id=IPR004576 interpro_description=Transcription-repair coupling factor GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 0.0 | puf:UFO1_0468 |
| no description (db=HMMSmart db_id=SM00487 from=522 to=712 evalue=2.6e-33 interpro_id=IPR014001 interpro_description=DEAD-like helicase) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 2.00e+00 | puf:UFO1_0468 |
| no description (db=HMMSmart db_id=SM00490 from=748 to=832 evalue=3.9e-16 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 3.00e+00 | puf:UFO1_0468 |
| HELICASE_ATP_BIND_1 (db=ProfileScan db_id=PS51192 from=540 to=701 evalue=21.82 interpro_id=IPR014001 interpro_description=DEAD-like helicase) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 2.10e+01 | puf:UFO1_0468 |
| HELICASE_CTER (db=ProfileScan db_id=PS51194 from=722 to=875 evalue=15.712 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.50e+01 | puf:UFO1_0468 |
| seg (db=Seg db_id=seg from=209 to=229) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | puf:UFO1_0468 |
| Transcription-repair coupling factor {ECO:0000313|EMBL:KKP36403.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;" |
UNIPROT
DB: UniProtKB |
100.0 | 999.99 | 2116 | 0.0 | A0A0F9YY89_9BACT |