| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase (EC:2.7.7.8) | similarity |
KEGG
DB: KEGG |
55.6 | 692.0 | 740 | 3.40e-211 | toc:Toce_1231 |
| Polyribonucleotide nucleotidyltransferase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3L0_THEOJ rbh | similarity |
UNIREF
DB: UNIREF90 |
55.0 | 0.0 | 740 | 4.00e+00 | toc:Toce_1231 |
| no description (db=Gene3D db_id=G3DSA:1.10.10.400 from=243 to=327 evalue=8.1e-07 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 8.00e+00 | toc:Toce_1231 |
| no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=628 to=701 evalue=5.7e-19 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 5.00e+00 | toc:Toce_1231 |
| Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=1 to=145 evalue=2.6e-47 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 2.00e+00 | toc:Toce_1231 |
| Ribonuclease PH domain 2-like (db=superfamily db_id=SSF55666 from=146 to=244 evalue=5.6e-29 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 5.00e+00 | toc:Toce_1231 |
| Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=617 to=700 evalue=9.6e-22 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 9.00e+00 | toc:Toce_1231 |
| Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=561 to=614 evalue=6.0e-15 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 6.00e+00 | toc:Toce_1231 |
| Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 (db=superfamily db_id=SSF46915 from=232 to=334 evalue=6.5e-15 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 6.00e+00 | toc:Toce_1231 |
| PNPase (db=HAMAP db_id=MF_01595 from=3 to=702 evalue=28.359 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HAMAP |
0.0 | 0.0 | 0 | 2.80e+01 | toc:Toce_1231 |
| (db=HMMPfam db_id=PF01138 from=12 to=145 evalue=2.4e-19 interpro_id=IPR001247 interpro_description=Exoribonuclease, phosphorolytic domain 1) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | toc:Toce_1231 |
| (db=HMMPfam db_id=PF03725 from=148 to=216 evalue=7.7e-17 interpro_id=IPR015847 interpro_description=Exoribonuclease, phosphorolytic domain 2 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 7.00e+00 | toc:Toce_1231 |
| (db=HMMPfam db_id=PF00575 from=628 to=699 evalue=8.5e-17 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 8.00e+00 | toc:Toce_1231 |
| (db=HMMPfam db_id=PF00013 from=565 to=617 evalue=1.5e-11 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | toc:Toce_1231 |
| (db=HMMPfam db_id=PF03726 from=248 to=328 evalue=1.8e-08 interpro_id=IPR015848 interpro_description=Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | toc:Toce_1231 |
| POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE (db=HMMPanther db_id=PTHR11252 from=146 to=702 evalue=2.0e-209 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 2.00e+00 | toc:Toce_1231 |
| polynuc_phos: polyribonucleotide nucleot (db=HMMTigr db_id=TIGR03591 from=10 to=701 evalue=0.0 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 0.0 | toc:Toce_1231 |
| no description (db=HMMSmart db_id=SM00322 from=561 to=626 evalue=2.0e-11 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 2.00e+00 | toc:Toce_1231 |
| no description (db=HMMSmart db_id=SM00316 from=629 to=699 evalue=6.1e-23 interpro_id=IPR022967 interpro_description=RNA-binding domain, S1) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 6.00e+00 | toc:Toce_1231 |
| KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=562 to=621 evalue=13.188 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.30e+01 | toc:Toce_1231 |
| S1 (db=ProfileScan db_id=PS50126 from=631 to=699 evalue=20.089 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 2.00e+01 | toc:Toce_1231 |
| Polyribonucleotide nucleotidyltransferase (db=HMMPIR db_id=PIRSF005499 from=1 to=702 evalue=0.0 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Biological Process: mRNA catabolic process (GO:0006402)) | iprscan |
interpro
DB: HMMPIR |
0.0 | 0.0 | 0 | 0.0 | toc:Toce_1231 |
| Polyribonucleotide nucleotidyltransferase, polyribonucleotide nucleotidyltransferase {ECO:0000313|EMBL:KKP39523.1}; EC=2.7.7.8 {ECO:0000313|EMBL:KKP39523.1};; TaxID=1619061 species="Bacteria; Peregrin |
UNIPROT
DB: UniProtKB |
100.0 | 702.0 | 1360 | 0.0 | A0A0F9Z714_9BACT |
Please be patient. You will receive a progress update momentarily.
