| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| RNA polymerase, sigma-24 subunit, ECF subfamily protein | similarity |
KEGG
DB: KEGG |
34.0 | 191.0 | 118 | 2.20e-24 | srb:P148_SR1C001G0682 |
| RNA polymerase, sigma-24 subunit, ECF subfamily n=6 Tax=Caldicellulosiruptor RepID=B9MNN6_CALBD | similarity |
UNIREF
DB: UNIREF90 |
35.0 | 0.0 | 114 | 2.00e+00 | srb:P148_SR1C001G0682 |
| no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=5 to=89 evalue=5.8e-17) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 5.00e+00 | srb:P148_SR1C001G0682 |
| Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=1 to=108 evalue=5.5e-20 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 5.00e+00 | srb:P148_SR1C001G0682 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=110 to=173 evalue=3.5e-12 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 3.00e+00 | srb:P148_SR1C001G0682 |
| (db=HMMPfam db_id=PF04542 from=21 to=88 evalue=3.5e-13 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 3.00e+00 | srb:P148_SR1C001G0682 |
| (db=HMMPfam db_id=PF08281 from=117 to=168 evalue=2.1e-10 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | srb:P148_SR1C001G0682 |
| sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=16 to=172 evalue=9.4e-37 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 9.00e+00 | srb:P148_SR1C001G0682 |
| ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated |
UNIPROT
DB: UniProtKB |
100.0 | 183.0 | 375 | 3.70e-101 | ggdbv1_89393351 |