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GWC2_PER_33_13_10_38 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase, sigma-24 subunit, ECF subfamily protein similarity KEGG
DB: KEGG
34.0 191.0 118 2.20e-24 srb:P148_SR1C001G0682
RNA polymerase, sigma-24 subunit, ECF subfamily n=6 Tax=Caldicellulosiruptor RepID=B9MNN6_CALBD similarity UNIREF
DB: UNIREF90
35.0 0.0 114 2.00e+00 srb:P148_SR1C001G0682
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=5 to=89 evalue=5.8e-17) iprscan interpro
DB: Gene3D
0.0 0.0 0 5.00e+00 srb:P148_SR1C001G0682
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=1 to=108 evalue=5.5e-20 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto iprscan interpro
DB: superfamily
0.0 0.0 0 5.00e+00 srb:P148_SR1C001G0682
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=110 to=173 evalue=3.5e-12 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily
0.0 0.0 0 3.00e+00 srb:P148_SR1C001G0682
(db=HMMPfam db_id=PF04542 from=21 to=88 evalue=3.5e-13 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 3.00e+00 srb:P148_SR1C001G0682
(db=HMMPfam db_id=PF08281 from=117 to=168 evalue=2.1e-10 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 srb:P148_SR1C001G0682
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=16 to=172 evalue=9.4e-37 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
0.0 0.0 0 9.00e+00 srb:P148_SR1C001G0682
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated UNIPROT
DB: UniProtKB
100.0 183.0 375 3.70e-101 ggdbv1_89393351