| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| RNA polymerase sigma factor n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HB96_ILYPC | similarity |
UNIREF
DB: UNIREF90 |
39.0 | 0.0 | 62 | 2.00e+00 | sbe:RAAC3_TM7C01G0635 |
| seg (db=Seg db_id=seg from=25 to=41) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | sbe:RAAC3_TM7C01G0635 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=33 to=45 evalue=4.0e-12 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 4.00e+00 | sbe:RAAC3_TM7C01G0635 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=28 to=94 evalue=4.4e-11 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Functio | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 4.00e+00 | sbe:RAAC3_TM7C01G0635 |
| SIGMA70_2 (db=PatternScan db_id=PS00716 from=53 to=79 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | sbe:RAAC3_TM7C01G0635 |
| no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=15 to=100 evalue=2.1e-11 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 2.00e+00 | sbe:RAAC3_TM7C01G0635 |
| (db=HMMPfam db_id=PF04545 from=33 to=79 evalue=6.4e-13 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 6.00e+00 | sbe:RAAC3_TM7C01G0635 |
| hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated |
UNIPROT
DB: UniProtKB |
100.0 | 364.0 | 716 | 1.80e-203 | ggdbv1_89393213 | |
| hypothetical protein |
KEGG
DB: KEGG |
33.1 | 341.0 | 197 | 5.60e-48 | sbe:RAAC3_TM7C01G0635 |