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GWC2_PER_33_13_20_5 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase sigma factor n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HB96_ILYPC similarity UNIREF
DB: UNIREF90
39.0 0.0 62 2.00e+00 sbe:RAAC3_TM7C01G0635
seg (db=Seg db_id=seg from=25 to=41) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 sbe:RAAC3_TM7C01G0635
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=33 to=45 evalue=4.0e-12 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 4.00e+00 sbe:RAAC3_TM7C01G0635
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=28 to=94 evalue=4.4e-11 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Functio iprscan interpro
DB: superfamily
0.0 0.0 0 4.00e+00 sbe:RAAC3_TM7C01G0635
SIGMA70_2 (db=PatternScan db_id=PS00716 from=53 to=79 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 sbe:RAAC3_TM7C01G0635
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=15 to=100 evalue=2.1e-11 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
0.0 0.0 0 2.00e+00 sbe:RAAC3_TM7C01G0635
(db=HMMPfam db_id=PF04545 from=33 to=79 evalue=6.4e-13 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 6.00e+00 sbe:RAAC3_TM7C01G0635
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated UNIPROT
DB: UniProtKB
100.0 364.0 716 1.80e-203 ggdbv1_89393213
hypothetical protein KEGG
DB: KEGG
33.1 341.0 197 5.60e-48 sbe:RAAC3_TM7C01G0635