ggKbase home page
Advanced Search
Search Help

gwf2_scaffold_1157_30 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rluB2; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.22) Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated UNIPROT
DB: UniProtKB 		100.0 237.0 477 9.00e-132 ggdbv1_89392107
rluB2; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.22) similarity KEGG
DB: KEGG 		41.9 236.0 190 4.40e-46 cad:Curi_c14280
Pseudouridine synthase, Rsu n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV82_9CLOT similarity UNIREF
DB: UNIREF90 		42.0 0.0 194 3.00e+00 cad:Curi_c14280
PSI_RSU (db=PatternScan db_id=PS01149 from=101 to=115 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: PatternScan 		0.0 0.0 0 0.0 cad:Curi_c14280
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=5 to=230 evalue=1.9e-58) iprscan interpro
DB: HMMPanther 		0.0 0.0 0 1.00e+00 cad:Curi_c14280
no description (db=HMMSmart db_id=SM00363 from=1 to=82 evalue=2.1e-05 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart 		0.0 0.0 0 2.00e+00 cad:Curi_c14280
TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=68 to=228 evalue=2.1e-53 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: HMMTigr 		0.0 0.0 0 2.00e+00 cad:Curi_c14280
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=60 to=237 evalue=3.4e-38 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily 		0.0 0.0 0 3.00e+00 cad:Curi_c14280
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=1 to=59 evalue=4.2e-11) iprscan interpro
DB: superfamily 		0.0 0.0 0 4.00e+00 cad:Curi_c14280
(db=HMMPfam db_id=PF00849 from=64 to=195 evalue=5.7e-23 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 5.00e+00 cad:Curi_c14280
(db=HMMPfam db_id=PF01479 from=1 to=37 evalue=6.1e-09 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 6.00e+00 cad:Curi_c14280
S4 (db=ProfileScan db_id=PS50889 from=1 to=70 evalue=12.666 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan 		0.0 0.0 0 1.20e+01 cad:Curi_c14280
similarity in-house
DB: RefSeq 		null null null null cad:Curi_c14280