Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
rluB2; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.22) | similarity |
KEGG
DB: KEGG |
44.4 | 232.0 | 210 | 4.10e-52 | cad:Curi_c14280 |
Pseudouridine synthase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXB2_CLOA9 | similarity |
UNIREF
DB: UNIREF90 |
44.0 | 0.0 | 210 | 5.00e+00 | cad:Curi_c14280 |
ribosomal large subunit pseudouridine synthase B Tax=PER_GWF2_39_17 |
UNIPROT
DB: UniProtKB |
100.0 | 234.0 | 478 | 4.00e-132 | ggdbv1_5096788 | |
PSI_RSU (db=PatternScan db_id=PS01149 from=100 to=114 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | cad:Curi_c14280 |
seg (db=Seg db_id=seg from=109 to=112) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | cad:Curi_c14280 |
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=59 to=234 evalue=1.8e-39 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | cad:Curi_c14280 |
no description (db=HMMSmart db_id=SM00363 from=1 to=63 evalue=4.1e-11 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 4.00e+00 | cad:Curi_c14280 |
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600:SF2 from=5 to=228 evalue=5.0e-65) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 5.00e+00 | cad:Curi_c14280 |
(db=HMMPfam db_id=PF00849 from=63 to=200 evalue=6.5e-19 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 6.00e+00 | cad:Curi_c14280 |
TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=67 to=232 evalue=7.7e-47 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 7.00e+00 | cad:Curi_c14280 |
(db=HMMPfam db_id=PF01479 from=1 to=46 evalue=7.6e-11 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 7.00e+00 | cad:Curi_c14280 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=1 to=60 evalue=8.5e-13) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 8.00e+00 | cad:Curi_c14280 |
S4 (db=ProfileScan db_id=PS50889 from=1 to=66 evalue=14.161 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.40e+01 | cad:Curi_c14280 |
similarity |
in-house
DB: RefSeq |
null | null | null | null | cad:Curi_c14280 |