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gwf2_scaffold_197_109 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA methyltransferase, TrmA family n=2 Tax=Rhodothermus marinus RepID=D0MFU4_RHOM4 rbh similarity UNIREF
DB: UNIREF90
40.0 0.0 321 3.00e+00 rmg:Rhom172_2568
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:KKR08988.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;" UNIPROT
DB: UniProtKB
100.0 487.0 985 3.60e-284 A0A0G0N0P1_9BACT
RNA methyltransferase, TrmA family similarity KEGG
DB: KEGG
40.9 477.0 326 1.10e-86 rmg:Rhom172_2568
TRMA_1 (db=PatternScan db_id=PS01230 from=413 to=444 evalue=0.0 interpro_id=IPR010280 interpro_description=(Uracil-5)-methyltransferase GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 rmg:Rhom172_2568
coiled-coil (db=Coil db_id=coil from=362 to=383 evalue=NA) iprscan interpro
DB: Coil
0.0 0.0 0 0.0 rmg:Rhom172_2568
RNA M5U METHYLTRANSFERASE (db=HMMPanther db_id=PTHR11061:SF2 from=47 to=485 evalue=1.5e-126) iprscan interpro
DB: HMMPanther
0.0 0.0 0 1.00e+00 rmg:Rhom172_2568
RNA M5U METHYLTRANSFERASE FAMILY (db=HMMPanther db_id=PTHR11061 from=47 to=485 evalue=1.5e-126) iprscan interpro
DB: HMMPanther
0.0 0.0 0 1.00e+00 rmg:Rhom172_2568
rumA: 23S rRNA (uracil-5-)-methyltransferase (db=HMMTigr db_id=TIGR00479 from=39 to=475 evalue=3.0e-83 interpro_id=IPR001566 interpro_description=23S rRNA methyltransferase/RumA GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 3.00e+00 rmg:Rhom172_2568
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=76 evalue=3.7e-07 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
0.0 0.0 0 3.00e+00 rmg:Rhom172_2568
(db=HMMPfam db_id=PF05958 from=279 to=482 evalue=4.5e-23 interpro_id=IPR010280 interpro_description=(Uracil-5)-methyltransferase GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 4.00e+00 rmg:Rhom172_2568
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=83 to=483 evalue=7.1e-71) iprscan interpro
DB: superfamily
0.0 0.0 0 7.00e+00 rmg:Rhom172_2568
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=305 to=463 evalue=8.3e-13) iprscan interpro
DB: Gene3D
0.0 0.0 0 8.00e+00 rmg:Rhom172_2568
TRAM (db=ProfileScan db_id=PS50926 from=2 to=76 evalue=10.269 interpro_id=IPR002792 interpro_description=Deoxyribonuclease/rho motif-related TRAM) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.00e+01 rmg:Rhom172_2568
similarity in-house
DB: RefSeq
null null null null rmg:Rhom172_2568