Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
RNA binding S1 domain protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B22D3 | similarity |
UNIREF
DB: UNIREF90 |
40.0 | 0.0 | 289 | 1.00e+00 | srb:P148_SR1C001G0661 |
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 Tax=PER_GWF2_39_17 |
UNIPROT
DB: UniProtKB |
100.0 | 425.0 | 825 | 4.10e-236 | ggdbv1_5097064 | |
RNA binding S1 protein | similarity |
KEGG
DB: KEGG |
39.8 | 430.0 | 303 | 1.10e-79 | srb:P148_SR1C001G0661 |
coiled-coil (db=Coil db_id=coil from=374 to=400 evalue=NA) | iprscan |
interpro
DB: Coil |
0.0 | 0.0 | 0 | 0.0 | srb:P148_SR1C001G0661 |
seg (db=Seg db_id=seg from=380 to=425) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | srb:P148_SR1C001G0661 |
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=37 to=109 evalue=0.0007 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 0.0 | srb:P148_SR1C001G0661 |
RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=40 to=58 evalue=2.5e-24 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 2.00e+00 | srb:P148_SR1C001G0661 |
TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=214 to=338 evalue=2.2e-11) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 2.00e+00 | srb:P148_SR1C001G0661 |
no description (db=HMMSmart db_id=SM00316 from=38 to=107 evalue=3.9e-08 interpro_id=IPR022967 interpro_description=RNA-binding domain, S1) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 3.00e+00 | srb:P148_SR1C001G0661 |
(db=HMMPfam db_id=PF00575 from=38 to=107 evalue=7.4e-06 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 7.00e+00 | srb:P148_SR1C001G0661 |
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=281 to=385 evalue=8.2e-26 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 8.00e+00 | srb:P148_SR1C001G0661 |
S1 (db=ProfileScan db_id=PS50126 from=40 to=107 evalue=14.981 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.40e+01 | srb:P148_SR1C001G0661 |