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gwf2_scaffold_332_30 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA binding S1 domain protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B22D3 similarity UNIREF
DB: UNIREF90
40.0 0.0 289 1.00e+00 srb:P148_SR1C001G0661
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 Tax=PER_GWF2_39_17 UNIPROT
DB: UniProtKB
100.0 425.0 825 4.10e-236 ggdbv1_5097064
RNA binding S1 protein similarity KEGG
DB: KEGG
39.8 430.0 303 1.10e-79 srb:P148_SR1C001G0661
coiled-coil (db=Coil db_id=coil from=374 to=400 evalue=NA) iprscan interpro
DB: Coil
0.0 0.0 0 0.0 srb:P148_SR1C001G0661
seg (db=Seg db_id=seg from=380 to=425) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 srb:P148_SR1C001G0661
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=37 to=109 evalue=0.0007 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
0.0 0.0 0 0.0 srb:P148_SR1C001G0661
RIBOSOMALS1 (db=FPrintScan db_id=PR00681 from=40 to=58 evalue=2.5e-24 interpro_id=IPR000110 interpro_description=Ribosomal protein S1 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 2.00e+00 srb:P148_SR1C001G0661
TEX PROTEIN-RELATEDTRANSCRIPTION ACCESSORY PROTEIN (S1 RNA BINDING DOMAIN) (db=HMMPanther db_id=PTHR10724 from=214 to=338 evalue=2.2e-11) iprscan interpro
DB: HMMPanther
0.0 0.0 0 2.00e+00 srb:P148_SR1C001G0661
no description (db=HMMSmart db_id=SM00316 from=38 to=107 evalue=3.9e-08 interpro_id=IPR022967 interpro_description=RNA-binding domain, S1) iprscan interpro
DB: HMMSmart
0.0 0.0 0 3.00e+00 srb:P148_SR1C001G0661
(db=HMMPfam db_id=PF00575 from=38 to=107 evalue=7.4e-06 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 7.00e+00 srb:P148_SR1C001G0661
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=281 to=385 evalue=8.2e-26 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
0.0 0.0 0 8.00e+00 srb:P148_SR1C001G0661
S1 (db=ProfileScan db_id=PS50126 from=40 to=107 evalue=14.981 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.40e+01 srb:P148_SR1C001G0661