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gwf2_scaffold_667_15 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase, sigma-E factor; heat shock and oxidative stress n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11RR3_CYTH3 similarity UNIREF
DB: UNIREF90 		37.0 0.0 121 2.00e+00 chu:CHU_2649
Heat shock and oxidative stress RNA polymerase sigma-E factor, RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:KKR26052.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source UNIPROT
DB: UniProtKB 		100.0 189.0 378 6.00e-102 A0A0G0SJY8_9BACT
rpoE; heat shock and oxidative stress RNA polymerase sigma-E factor similarity KEGG
DB: KEGG 		37.5 184.0 122 1.50e-25 chu:CHU_2649
seg (db=Seg db_id=seg from=113 to=131) iprscan interpro
DB: Seg 		0.0 0.0 0 0.0 chu:CHU_2649
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=1 to=111 evalue=1.8e-21 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto iprscan interpro
DB: superfamily 		0.0 0.0 0 1.00e+00 chu:CHU_2649
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=116 to=186 evalue=1.1e-10 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily 		0.0 0.0 0 1.00e+00 chu:CHU_2649
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=7 to=94 evalue=1.0e-16) iprscan interpro
DB: Gene3D 		0.0 0.0 0 1.00e+00 chu:CHU_2649
(db=HMMPfam db_id=PF04542 from=23 to=91 evalue=3.1e-14 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 3.00e+00 chu:CHU_2649
(db=HMMPfam db_id=PF08281 from=129 to=180 evalue=3.2e-12 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam 		0.0 0.0 0 3.00e+00 chu:CHU_2649
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=18 to=184 evalue=6.5e-38 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr 		0.0 0.0 0 6.00e+00 chu:CHU_2649