Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
Pseudouridine synthase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AC89_THEID | similarity |
UNIREF
DB: UNIREF90 |
43.0 | 0.0 | 242 | 1.00e+00 | tid:Thein_1869 |
RNA pseudouridine synthase Tax=PER_GWF2_39_17 |
UNIPROT
DB: UniProtKB |
100.0 | 315.0 | 628 | 4.20e-177 | ggdbv1_5097425 | |
RluA family pseudouridine synthase | similarity |
KEGG
DB: KEGG |
43.2 | 310.0 | 243 | 1.00e-61 | tid:Thein_1869 |
PSI_RLU (db=PatternScan db_id=PS01129 from=137 to=151 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: PatternScan |
0.0 | 0.0 | 0 | 0.0 | tid:Thein_1869 |
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=18 to=75 evalue=1.2e-08) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | tid:Thein_1869 |
rluA_subfam: pseudouridine synthase, RluA (db=HMMTigr db_id=TIGR00005 from=14 to=314 evalue=2.3e-94 interpro_id=IPR006225 interpro_description=Pseudouridine synthase, RluC/RluD GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 2.00e+00 | tid:Thein_1869 |
no description (db=HMMSmart db_id=SM00363 from=19 to=79 evalue=2.4e-06 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: HMMSmart |
0.0 | 0.0 | 0 | 2.00e+00 | tid:Thein_1869 |
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=74 to=312 evalue=2.8e-64 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 2.00e+00 | tid:Thein_1869 |
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=20 to=312 evalue=7.0e-66) | iprscan |
interpro
DB: HMMPanther |
0.0 | 0.0 | 0 | 7.00e+00 | tid:Thein_1869 |
(db=HMMPfam db_id=PF00849 from=91 to=250 evalue=9.8e-32 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 9.00e+00 | tid:Thein_1869 |
S4 (db=ProfileScan db_id=PS50889 from=19 to=79 evalue=11.68 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) | iprscan |
interpro
DB: ProfileScan |
0.0 | 0.0 | 0 | 1.10e+01 | tid:Thein_1869 |
similarity |
in-house
DB: RefSeq |
null | null | null | null | tid:Thein_1869 |