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gwf2_scaffold_913_28 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Pseudouridine synthase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AC89_THEID similarity UNIREF
DB: UNIREF90
43.0 0.0 242 1.00e+00 tid:Thein_1869
RNA pseudouridine synthase Tax=PER_GWF2_39_17 UNIPROT
DB: UniProtKB
100.0 315.0 628 4.20e-177 ggdbv1_5097425
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
43.2 310.0 243 1.00e-61 tid:Thein_1869
PSI_RLU (db=PatternScan db_id=PS01129 from=137 to=151 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 tid:Thein_1869
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=18 to=75 evalue=1.2e-08) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 tid:Thein_1869
rluA_subfam: pseudouridine synthase, RluA (db=HMMTigr db_id=TIGR00005 from=14 to=314 evalue=2.3e-94 interpro_id=IPR006225 interpro_description=Pseudouridine synthase, RluC/RluD GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 2.00e+00 tid:Thein_1869
no description (db=HMMSmart db_id=SM00363 from=19 to=79 evalue=2.4e-06 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 2.00e+00 tid:Thein_1869
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=74 to=312 evalue=2.8e-64 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 tid:Thein_1869
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=20 to=312 evalue=7.0e-66) iprscan interpro
DB: HMMPanther
0.0 0.0 0 7.00e+00 tid:Thein_1869
(db=HMMPfam db_id=PF00849 from=91 to=250 evalue=9.8e-32 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 9.00e+00 tid:Thein_1869
S4 (db=ProfileScan db_id=PS50889 from=19 to=79 evalue=11.68 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.10e+01 tid:Thein_1869
similarity in-house
DB: RefSeq
null null null null tid:Thein_1869