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gwf2_scaffold_1133_25 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
mfd; transcription-repair coupling factor (EC:3.6.1.-); K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=PER_GWF2_39_17 UNIPROT
DB: UniProtKB
100.0 999.99 2105 0.0 ggdbv1_5097493
mfd; transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
40.7 970.0 674 4.60e-191 atm:ANT_20420
Transcription-repair coupling factor n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MXI7_ANATU rbh similarity UNIREF
DB: UNIREF90
40.0 0.0 674 6.00e+00 atm:ANT_20420
seg (db=Seg db_id=seg from=228 to=239) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 atm:ANT_20420
mfd: transcription-repair coupling factor (db=HMMTigr db_id=TIGR00580 from=140 to=990 evalue=0.0 interpro_id=IPR004576 interpro_description=Transcription-repair coupling factor GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 0.0 atm:ANT_20420
(db=HMMPfam db_id=PF02559 from=390 to=486 evalue=2.3e-27 interpro_id=IPR003711 interpro_description=CarD-like/TRCF domain) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 atm:ANT_20420
(db=HMMPfam db_id=PF03461 from=916 to=993 evalue=2.3e-20 interpro_id=IPR005118 interpro_description=Transcription-repair-coupling factor domain GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 atm:ANT_20420
(db=HMMPfam db_id=PF00271 from=747 to=819 evalue=2.8e-11 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 atm:ANT_20420
no description (db=HMMSmart db_id=SM00490 from=736 to=820 evalue=2.9e-17 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 2.00e+00 atm:ANT_20420
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=458 to=751 evalue=2.0e-71) iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 atm:ANT_20420
(db=HMMPfam db_id=PF00270 from=515 to=674 evalue=3.1e-19 interpro_id=IPR011545 interpro_description=DNA/RNA helicase, DEAD/DEAH box type, N-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: ATP binding (GO:0005524), Molecular Function: ATP-dependent helicase activity (GO:0008026)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 3.00e+00 atm:ANT_20420
no description (db=HMMSmart db_id=SM00487 from=510 to=700 evalue=3.0e-34 interpro_id=IPR014001 interpro_description=DEAD-like helicase) iprscan interpro
DB: HMMSmart
0.0 0.0 0 3.00e+00 atm:ANT_20420
CarD-like (db=superfamily db_id=SSF141259 from=379 to=458 evalue=3.2e-22 interpro_id=IPR003711 interpro_description=CarD-like/TRCF domain) iprscan interpro
DB: superfamily
0.0 0.0 0 3.00e+00 atm:ANT_20420
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=121 to=210 evalue=4.8e-12) iprscan interpro
DB: Gene3D
0.0 0.0 0 4.00e+00 atm:ANT_20420
TRCF domain-like (db=superfamily db_id=SSF143517 from=901 to=1062 evalue=4.7e-25) iprscan interpro
DB: superfamily
0.0 0.0 0 4.00e+00 atm:ANT_20420
HELICASE_CTER (db=ProfileScan db_id=PS51194 from=710 to=863 evalue=14.682 interpro_id=IPR001650 interpro_description=Helicase, C-terminal GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: helicase activity (GO:0004386), Molecular Function: ATP binding (GO:0005524)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.40e+01 atm:ANT_20420
HELICASE_ATP_BIND_1 (db=ProfileScan db_id=PS51192 from=528 to=689 evalue=22.505 interpro_id=IPR014001 interpro_description=DEAD-like helicase) iprscan interpro
DB: ProfileScan
0.0 0.0 0 2.20e+01 atm:ANT_20420