ggKbase home page

gwf2_scaffold_2732_19 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
50S ribosomal protein L20 n=3 Tax=Bordetella RepID=RL20_BORPD similarity UNIREF
DB: UNIREF90
64.0 0.0 141 2.00e+00 axs:LH59_09675
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=PER_GWF2_39_17 UNIPROT
DB: UniProtKB
100.0 114.0 223 1.90e-55 ggdbv1_5097599
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
64.9 111.0 141 1.10e-31 axs:LH59_09675
RIBOSOMAL_L20 (db=PatternScan db_id=PS00937 from=54 to=70 evalue=0.0 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 axs:LH59_09675
RIBOSOMALL20 (db=FPrintScan db_id=PR00062 from=12 to=41 evalue=1.5e-35 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 1.00e+00 axs:LH59_09675
50S RIBOSOMAL PROTEIN L20 (db=HMMPanther db_id=PTHR10986 from=1 to=114 evalue=2.8e-39 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPanther
0.0 0.0 0 2.00e+00 axs:LH59_09675
Ribosomal protein L20 (db=superfamily db_id=SSF74731 from=61 to=114 evalue=3.8e-18) iprscan interpro
DB: superfamily
0.0 0.0 0 3.00e+00 axs:LH59_09675
(db=HMMPfam db_id=PF00453 from=2 to=109 evalue=4.1e-43 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 4.00e+00 axs:LH59_09675
rplT_bact: ribosomal protein L20 (db=HMMTigr db_id=TIGR01032 from=1 to=114 evalue=4.7e-60 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 4.00e+00 axs:LH59_09675
Ribosomal_L20 (db=HAMAP db_id=MF_00382 from=2 to=114 evalue=25.411 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HAMAP
0.0 0.0 0 2.50e+01 axs:LH59_09675
  • SCG Annotations
  • BSCG ribosomal protein L20