ggKbase home page

gwf2_scaffold_826_19 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
MiaB-like protein tRNA modifying protein YliG, ribosomal protein S12 methylthiotransferase {ECO:0000313|EMBL:KKT02029.1}; EC=2.-.-.- {ECO:0000313|EMBL:KKT02029.1};; TaxID=1619068 species="Bacteria; Pe UNIPROT
DB: UniProtKB
100.0 422.0 837 6.10e-240 A0A0G1GTP8_9BACT
Ribosomal protein S12 methylthiotransferase RimO n=6 Tax=Clostridium thermocellum RepID=RIMO_CLOTH rbh similarity UNIREF
DB: UNIREF90
41.0 0.0 345 2.00e+00 ctx:Clo1313_1275
MiaB-like tRNA modifying enzyme YliG similarity KEGG
DB: KEGG
41.9 444.0 346 1.50e-92 ctx:Clo1313_1275
MTTASE_RADICAL (db=PatternScan db_id=PS01278 from=139 to=159 evalue=0.0 interpro_id=IPR020612 interpro_description=Methylthiotransferase, conserved site GO=Cellular Component: cellular_component (GO:0005575), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 ctx:Clo1313_1275
no description (db=HMMSmart db_id=SM00729 from=135 to=353 evalue=1.4e-53 interpro_id=IPR006638 interpro_description=Elongator protein 3/MiaB/NifB GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 1.00e+00 ctx:Clo1313_1275
(db=HMMPfam db_id=PF04055 from=140 to=311 evalue=1.3e-27 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 ctx:Clo1313_1275
RADICAL SAM PROTEINS (db=HMMPanther db_id=PTHR11918 from=1 to=376 evalue=1.5e-90 interpro_id=IPR023970 interpro_description=Methylthiotransferase/B12-binding/radical SAM-type) iprscan interpro
DB: HMMPanther
0.0 0.0 0 1.00e+00 ctx:Clo1313_1275
no description (db=Gene3D db_id=G3DSA:3.20.20.70 from=142 to=363 evalue=1.7e-05 interpro_id=IPR013785 interpro_description=Aldolase-type TIM barrel GO=Molecular Function: catalytic activity (GO:0003824)) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 ctx:Clo1313_1275
TIGR00089: RNA modification enzyme, MiaB fa (db=HMMTigr db_id=TIGR00089 from=2 to=420 evalue=5.8e-132 interpro_id=IPR005839 interpro_description=Methylthiotransferase GO=Molecular Function: transferase activity (GO:0016740), Biological Process: macromolecule modification (GO:0043412), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 5.00e+00 ctx:Clo1313_1275
TIGR01125: MiaB-like tRNA modifying enzyme (db=HMMTigr db_id=TIGR01125 from=2 to=420 evalue=7.3e-143 interpro_id=IPR005840 interpro_description=Ribosomal protein S12 methylthiotransferase RimO GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: transferase activity (GO:0016740), Biological Process: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid (GO:0018339), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 7.00e+00 ctx:Clo1313_1275
(db=HMMPfam db_id=PF00919 from=2 to=85 evalue=8.8e-16 interpro_id=IPR013848 interpro_description=Methylthiotransferase, N-terminal GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: RNA modification (GO:0009451), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 8.00e+00 ctx:Clo1313_1275
TRAM (db=ProfileScan db_id=PS50926 from=364 to=422 evalue=9.58 interpro_id=IPR002792 interpro_description=Deoxyribonuclease/rho motif-related TRAM) iprscan interpro
DB: ProfileScan
0.0 0.0 0 9.00e+00 ctx:Clo1313_1275
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=133 to=387 evalue=9.6e-59) iprscan interpro
DB: superfamily
0.0 0.0 0 9.00e+00 ctx:Clo1313_1275
MTTASE_N (db=ProfileScan db_id=PS51449 from=1 to=107 evalue=19.744 interpro_id=IPR013848 interpro_description=Methylthiotransferase, N-terminal GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: RNA modification (GO:0009451), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.90e+01 ctx:Clo1313_1275
MTTase_RimO (db=HAMAP db_id=MF_01865 from=1 to=422 evalue=50.725 interpro_id=IPR005840 interpro_description=Ribosomal protein S12 methylthiotransferase RimO GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: transferase activity (GO:0016740), Biological Process: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid (GO:0018339), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539)) iprscan interpro
DB: HAMAP
0.0 0.0 0 5.00e+01 ctx:Clo1313_1275