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gwc1_scaffold_103_14 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
pseudouridine synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
29.8 312.0 136 1.70e-29 bpb:bpr_I1474
Pseudouridine synthase RluA family n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0RWB3_BUTPB similarity UNIREF
DB: UNIREF90
29.0 0.0 135 2.00e+00 bpb:bpr_I1474
S4 (db=ProfileScan db_id=PS50889 from=12 to=75 evalue=9.046 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 9.00e+00 bpb:bpr_I1474
(db=HMMPfam db_id=PF00849 from=98 to=274 evalue=3.9e-20 interpro_id=IPR006145 interpro_description=Pseudouridine synthase, RsuA and RluB/C/D/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 3.00e+00 bpb:bpr_I1474
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=1 to=306 evalue=1.1e-27) iprscan interpro
DB: HMMPanther
0.0 0.0 0 1.00e+00 bpb:bpr_I1474
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=80 to=316 evalue=1.5e-35 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 bpb:bpr_I1474
PSI_RLU (db=PatternScan db_id=PS01129 from=144 to=158 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 bpb:bpr_I1474
similarity in-house
DB: RefSeq
null null null null bpb:bpr_I1474
pseudouridine synthase (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFOXYB1_FULL_WS6_33_15_curated UNIPROT
DB: UniProtKB
100.0 317.0 639 3.10e-180 ggdbv1_89418222