ggKbase home page

gwe1_scaffold_467_10 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
50S ribosomal protein L23 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKI4_DESK7 similarity UNIREF
DB: UNIREF90
49.0 0.0 80 2.00e+00 dru:Desru_0300
50S ribosomal protein L23 {ECO:0000313|EMBL:KKP54661.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;" UNIPROT
DB: UniProtKB
100.0 97.0 195 4.80e-47 A0A0G0ATB8_9BACT
50S ribosomal protein L25 similarity KEGG
DB: KEGG
51.6 91.0 81 1.20e-13 dru:Desru_0300
RIBOSOMAL_L23 (db=PatternScan db_id=PS00050 from=79 to=94 evalue=0.0 interpro_id=IPR001014 interpro_description=Ribosomal protein L23/L25, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 dru:Desru_0300
seg (db=Seg db_id=seg from=38 to=51) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 dru:Desru_0300
(db=HMMPfam db_id=PF00276 from=8 to=93 evalue=1.3e-22 interpro_id=IPR013025 interpro_description=Ribosomal protein L25/L23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 dru:Desru_0300
Ribosomal proteins S24e, L23 and L15e (db=superfamily db_id=SSF54189 from=1 to=96 evalue=1.2e-19 interpro_id=IPR012678 interpro_description=Ribosomal protein L23/L15e core domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 dru:Desru_0300
no description (db=Gene3D db_id=G3DSA:3.30.70.330 from=2 to=94 evalue=5.1e-17 interpro_id=IPR012677 interpro_description=Nucleotide-binding, alpha-beta plait GO=Molecular Function: nucleotide binding (GO:0000166)) iprscan interpro
DB: Gene3D
0.0 0.0 0 5.00e+00 dru:Desru_0300
  • SCG Annotations
  • BSCG ribosomal protein L23