ggKbase home page

gwe1_scaffold_476_6 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Excinuclease ABC C subunit domain protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SZ23_PLAL2 similarity UNIREF
DB: UNIREF90
34.0 0.0 243 1.00e+00 wwe:P147_WWE3C01G0156
Excinuclease ABC subunit C, excinuclease ABC subunit C {ECO:0000313|EMBL:KKP45745.1}; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33 UNIPROT
DB: UniProtKB
100.0 493.0 980 6.80e-283 A0A0G0C3D7_9BACT
Excinuclease ABC subunit C similarity KEGG
DB: KEGG
34.9 453.0 252 3.40e-64 wwe:P147_WWE3C01G0156
seg (db=Seg db_id=seg from=344 to=355) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 wwe:P147_WWE3C01G0156
no description (db=Gene3D db_id=G3DSA:4.10.860.10 from=180 to=240 evalue=0.0006) iprscan interpro
DB: Gene3D
0.0 0.0 0 0.0 wwe:P147_WWE3C01G0156
(db=HMMPfam db_id=PF02151 from=205 to=236 evalue=1.1e-09 interpro_id=IPR001943 interpro_description=UvrB/UvrC protein GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 wwe:P147_WWE3C01G0156
RuvA domain 2-like (db=superfamily db_id=SSF47781 from=413 to=492 evalue=3.1e-16 interpro_id=IPR010994 interpro_description=RuvA domain 2-like) iprscan interpro
DB: superfamily
0.0 0.0 0 3.00e+00 wwe:P147_WWE3C01G0156
no description (db=HMMSmart db_id=SM00465 from=15 to=97 evalue=3.1e-16 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 3.00e+00 wwe:P147_WWE3C01G0156
(db=HMMPfam db_id=PF08459 from=267 to=425 evalue=5.4e-36 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 5.00e+00 wwe:P147_WWE3C01G0156
(db=HMMPfam db_id=PF01541 from=16 to=92 evalue=5.9e-10 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 5.00e+00 wwe:P147_WWE3C01G0156
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=14 to=99 evalue=5.8e-20 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: superfamily
0.0 0.0 0 5.00e+00 wwe:P147_WWE3C01G0156
C-terminal UvrC-binding domain of UvrB (db=superfamily db_id=SSF46600 from=187 to=242 evalue=7.3e-11 interpro_id=IPR009055 interpro_description=UvrB, C-terminal UvrC-binding GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: superfamily
0.0 0.0 0 7.00e+00 wwe:P147_WWE3C01G0156
UVR (db=ProfileScan db_id=PS50151 from=202 to=237 evalue=10.875 interpro_id=IPR001943 interpro_description=UvrB/UvrC protein GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 1.00e+01 wwe:P147_WWE3C01G0156
UVRC_1 (db=ProfileScan db_id=PS50164 from=16 to=92 evalue=22.802 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 2.20e+01 wwe:P147_WWE3C01G0156
UVRC_2 (db=ProfileScan db_id=PS50165 from=249 to=368 evalue=29.694 interpro_id=IPR001162 interpro_description=Excinuclease ABC, C subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: nuclease activity (GO:0004518), Biological Process: nucleotide-excision repair (GO:0006289)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 2.90e+01 wwe:P147_WWE3C01G0156