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gwf1_scaffold_934_31 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
Transcription termination factor NusA n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYI3_9FIRM rbh similarity UNIREF
DB: UNIREF90
43.0 0.0 328 2.00e+00 rca:Rcas_1134
NusA antitermination factor, N utilization substance protein A {ECO:0000313|EMBL:KKP43650.1}; TaxID=1619089 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011 UNIPROT
DB: UniProtKB
100.0 406.0 771 5.20e-220 A0A0G0BXP6_9BACT
NusA antitermination factor similarity KEGG
DB: KEGG
45.0 402.0 317 5.40e-84 rca:Rcas_1134
no description (db=HMMSmart db_id=SM00316 from=148 to=210 evalue=0.0048 interpro_id=IPR022967 interpro_description=RNA-binding domain, S1) iprscan interpro
DB: HMMSmart
0.0 0.0 0 0.0 rca:Rcas_1134
no description (db=HMMSmart db_id=SM00322 from=309 to=378 evalue=0.00088 interpro_id=IPR004087 interpro_description=K Homology GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 0.0 rca:Rcas_1134
seg (db=Seg db_id=seg from=76 to=89) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 rca:Rcas_1134
coiled-coil (db=Coil db_id=coil from=349 to=395 evalue=NA) iprscan interpro
DB: Coil
0.0 0.0 0 0.0 rca:Rcas_1134
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=224 to=302 evalue=1.5e-29 interpro_id=IPR015946 interpro_description=K homology domain-like, alpha/beta) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 rca:Rcas_1134
TRANSCRIPTION TERMINATION FACTOR NUSA (db=HMMPanther db_id=PTHR22648 from=1 to=393 evalue=2.3e-95) iprscan interpro
DB: HMMPanther
0.0 0.0 0 2.00e+00 rca:Rcas_1134
Transcription factor NusA, N-terminal domain (db=superfamily db_id=SSF69705 from=3 to=141 evalue=2.7e-33 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription termination, DNA-dependent (GO:0031554)) iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 rca:Rcas_1134
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=146 to=209 evalue=2.3e-11 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 rca:Rcas_1134
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=165 to=223 evalue=2.9e-11 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
0.0 0.0 0 2.00e+00 rca:Rcas_1134
(db=HMMPfam db_id=PF08529 from=6 to=139 evalue=3.4e-36 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription termination, DNA-dependent (GO:0031554)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 3.00e+00 rca:Rcas_1134
no description (db=Gene3D db_id=G3DSA:3.30.1480.10 from=3 to=149 evalue=5.1e-34 interpro_id=IPR013735 interpro_description=Transcription factor NusA, N-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription termination, DNA-dependent (GO:0031554)) iprscan interpro
DB: Gene3D
0.0 0.0 0 5.00e+00 rca:Rcas_1134
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=210 to=287 evalue=7.3e-31 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: superfamily
0.0 0.0 0 7.00e+00 rca:Rcas_1134
NusA: transcription termination factor NusA (db=HMMTigr db_id=TIGR01953 from=6 to=351 evalue=7.3e-133 interpro_id=IPR010213 interpro_description=Transcription termination factor NusA GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 7.00e+00 rca:Rcas_1134
KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=310 to=346 evalue=9.267 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 9.00e+00 rca:Rcas_1134
S1 (db=ProfileScan db_id=PS50126 from=150 to=210 evalue=9.289 interpro_id=IPR003029 interpro_description=Ribosomal protein S1, RNA-binding domain GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: ProfileScan
0.0 0.0 0 9.00e+00 rca:Rcas_1134