ggKbase home page

gwf1_scaffold_3452_18 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
30S ribosomal protein S12 n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GR10_FILAD similarity UNIREF
DB: UNIREF90
65.0 0.0 183 4.00e+00 cso:CLS_12470
SSU ribosomal protein S12P Tax=RIFOXYB1_FULL_WS6_33_15_curated UNIPROT
DB: UniProtKB
100.0 138.0 278 6.10e-72 ggdbv1_89418345
SSU ribosomal protein S12P similarity KEGG
DB: KEGG
65.2 138.0 184 2.40e-44 cso:CLS_12470
RIBOSOMAL_S12 (db=PatternScan db_id=PS00055 from=56 to=63 evalue=0.0 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
0.0 0.0 0 0.0 cso:CLS_12470
Ribosomal protein, S12p/S12a/S23e/organellar S12 types (db=HMMPIR db_id=PIRSF002133 from=1 to=137 evalue=1.8e-65 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPIR
0.0 0.0 0 1.00e+00 cso:CLS_12470
rpsL_bact: ribosomal protein S12 (db=HMMTigr db_id=TIGR00981 from=1 to=137 evalue=1.4e-73 interpro_id=IPR005679 interpro_description=Ribosomal protein S12, bacteria GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 1.00e+00 cso:CLS_12470
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=136 evalue=1.5e-45 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 cso:CLS_12470
30S RIBOSOMAL PROTEIN S12 (db=HMMPanther db_id=PTHR11652:SF1 from=1 to=136 evalue=2.0e-61) iprscan interpro
DB: HMMPanther
0.0 0.0 0 2.00e+00 cso:CLS_12470
30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER (db=HMMPanther db_id=PTHR11652 from=1 to=136 evalue=2.0e-61 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPanther
0.0 0.0 0 2.00e+00 cso:CLS_12470
(db=HMMPfam db_id=PF00164 from=2 to=135 evalue=5.7e-45 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 5.00e+00 cso:CLS_12470
RIBOSOMALS12 (db=FPrintScan db_id=PR01034 from=40 to=55 evalue=5.0e-50 interpro_id=IPR005679 interpro_description=Ribosomal protein S12, bacteria GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: FPrintScan
0.0 0.0 0 5.00e+00 cso:CLS_12470
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=2 to=136 evalue=8.8e-45 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like) iprscan interpro
DB: superfamily
0.0 0.0 0 8.00e+00 cso:CLS_12470
  • SCG Annotations
  • BSCG ribosomal protein S12