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gwf1_scaffold_3452_19 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase subunit beta' n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0B7_DEHLB rbh similarity UNIREF
DB: UNIREF90
42.0 0.0 1038 0.0 dmx:X792_02945
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKP55302.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;" UNIPROT
DB: UniProtKB
100.0 999.99 2532 0.0 A0A0G0DIV8_9BACT
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
42.5 999.99 1041 0.0 dmx:X792_02945
seg (db=Seg db_id=seg from=2 to=13) iprscan interpro
DB: Seg
0.0 0.0 0 0.0 dmx:X792_02945
rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=15 to=1286 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr
0.0 0.0 0 0.0 dmx:X792_02945
beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=10 to=1294 evalue=0.0) iprscan interpro
DB: superfamily
0.0 0.0 0 0.0 dmx:X792_02945
DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=11 to=1279 evalue=0.0) iprscan interpro
DB: HMMPanther
0.0 0.0 0 0.0 dmx:X792_02945
DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=11 to=1279 evalue=0.0) iprscan interpro
DB: HMMPanther
0.0 0.0 0 0.0 dmx:X792_02945
coiled-coil (db=Coil db_id=coil from=143 to=164 evalue=NA) iprscan interpro
DB: Coil
0.0 0.0 0 0.0 dmx:X792_02945
no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=9 to=431 evalue=1.7e-105) iprscan interpro
DB: Gene3D
0.0 0.0 0 1.00e+00 dmx:X792_02945
(db=HMMPfam db_id=PF04998 from=820 to=1240 evalue=2.1e-56 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 2.00e+00 dmx:X792_02945
(db=HMMPfam db_id=PF04997 from=12 to=428 evalue=4.4e-76 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 4.00e+00 dmx:X792_02945
(db=HMMPfam db_id=PF00623 from=430 to=568 evalue=6.4e-44 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 6.00e+00 dmx:X792_02945
(db=HMMPfam db_id=PF04983 from=575 to=713 evalue=6.5e-19 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 6.00e+00 dmx:X792_02945
no description (db=HMMSmart db_id=SM00663 from=320 to=600 evalue=9.6e-139 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMSmart
0.0 0.0 0 9.00e+00 dmx:X792_02945