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NECEvent2014_8_7_scaffold_1377_4

Organism: NECEvent2014_8_7_Enterobacter_cloacae-rel_55_14_partial

partial RP 18 / 55 MC: 2 BSCG 16 / 51 ASCG 9 / 38 MC: 1
Location: 3788..4147

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1448 Tax=Enterobacteriaceae RepID=DKSA_ECO57 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 120.0
  • Bit_score: 244
  • Evalue 4.60e-62
dksA; DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 120.0
  • Bit_score: 244
  • Evalue 1.30e-62
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=766150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 120.0
  • Bit_score: 244
  • Evalue 6.50e-62

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Taxonomy

Shigella flexneri → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGCAAGAAGGGCAAAACCGTAAAACATCGTCCCTGAGTATTCTCGCCATCGCTGGGGTGGAGCCGTATCAAGAGAAACCGGGCGAAGAGTATATGAATGAAGCCCAGCTGGCGCACTTCAGGCGTATTCTTGAAGCGTGGCGTAATCAACTCAGGGATGAAGTCGATCGCACCGTCACCCATATGCAGGATGAAGCAGCTAACTTCCCGGACCCGGTAGACCGTGCCGCACAGGAAGAAGAGTTCAGCCTCGAACTGCGTAACCGTGACCGCGAGCGTAAACTGATCAAAAAGATCGAGAAAACGCTGAAAAAAGTTGAAGACGAAGATTTCGGCTACTGCGAATCCTGCGGTGTTGAA
PROTEIN sequence
Length: 120
MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE