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13_2_20cm_scaffold_1170_4

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 2963..3670

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RPB7_BLASD similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 217.0
  • Bit_score: 205
  • Evalue 4.70e-50
sigF; RNA polymerase sigma-F factor similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 217.0
  • Bit_score: 205
  • Evalue 1.30e-50
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily {ECO:0000313|EMBL:ADP78886.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 221.0
  • Bit_score: 205
  • Evalue 6.60e-50

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 708
GTGTTCGAGACGCGTCGTCCGGCCGCTCAGGCCGAGGAACTGGTAGAGGAGTACCTCCCACTCGCACGGCGCCTCGCCATGCGCTACCGCTACACGAGCGAGCCGATCGAAGACCTGGTGCAGGTCGCGTCAATGGGACTCGTGCTCGCGGCGCGGCGGTACGACGCCGAGCGCGGTACATCGTTTGCGAGCTTCGCGGTCCCCACGATCATCGGGGAGCTGCGGCGCCACATTCGCGACCACGGCTGGTCGGCGCGCGTGCCGCGGAGCGTGCAGGAGAACGTGATGAAGGTGCACGCCGCCACCGACGAGCTGGGTGCCCGTATCGGCCGCTCCCCGTCACCCAGGGAGCTCGCCGCCGAGACCGATCTCGGCGTGGAGGATGTCCTCGAGGCGACGCTGGCCACAACGGCCTACGAGGCGGCGTCGCTCGACCATCGGATTGACGGCGACGACGACTCCCCCGAGCCTCCGATCACGATCGGCGTTGACGACCCGGGCTACGAGCACGTCGAGCGCGCTGTCGTGATCTGGCCGGCCGTCAGTGAGCTCCCACCAGACGAGCGCGCGGTGGTGGCGCTCCGCTTCCTGGGCGACCTCACCCAGTCGGAGATCGCCGCGATGATCGGCGTCTCCCAGATGCAGGTATCGCGCCTCCTGCGCCGCGCCCTCGACCGCATCCACACGGCGACTGCCGCGGCGGTCTGA
PROTEIN sequence
Length: 236
VFETRRPAAQAEELVEEYLPLARRLAMRYRYTSEPIEDLVQVASMGLVLAARRYDAERGTSFASFAVPTIIGELRRHIRDHGWSARVPRSVQENVMKVHAATDELGARIGRSPSPRELAAETDLGVEDVLEATLATTAYEAASLDHRIDGDDDSPEPPITIGVDDPGYEHVERAVVIWPAVSELPPDERAVVALRFLGDLTQSEIAAMIGVSQMQVSRLLRRALDRIHTATAAAV*