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13_2_20cm_scaffold_1487_3

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(2053..3285)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UVY8_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 409.0
  • Bit_score: 539
  • Evalue 4.10e-150
putative RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 409.0
  • Bit_score: 542
  • Evalue 6.80e-151
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 409.0
  • Bit_score: 539
  • Evalue 1.10e-150

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Taxonomy

RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1233
ATGGGGCTCGGTCGAAGTGCGCCCGGTGTGGGACAAGACCTCATAGACACGATCGAGTCGGTCTACCGCGCCGAGTCGCGCCGCGTGCTTGCCACCCTGATCCGTCTCCTCGGTGATTTCGATCTCGCCGAGGAGGCGCTGCAGGAGGCGTTCGCGGCGGCCGTCGAGAAGTGGCCGACCGAGGGCATTCCGTCCAACCCTCGAGCGTGGCTCGTGTCGACCGGTCGGTTCAAGGCAATCGATCGTCTGCGTCGCAGCCAGCGCGAAGTCTCCGAGGAACACGGCGTGCCGCAAGCAGCCGCGGAGTACAAAGAAGTCGCCGACGACGAGCTGCGGCTGATCTTCACCTGCTGTCACCCTGCCCTGTCACCCGATGCGCAGGTGGCGCTGACGCTGCGCGAAGTCTGCGGCCTCACGACCGAGGAGATCGCGCGCGCATTTCTGACGACGGCCCCGACCGTGGCCCAGCGGATCGTCCGCGCCAAAGGAAAGATCAAAGGCGCCGGCATTCCGTACGAAGTTCCCGCCCTCTCCGATCTCCCGGAACGGCTCGATGCCGTGCTGCGCGTCGTCTACCTCGTGTTCAATGAGGGTTACCGCTTCCGGCACGATCTCTCGGGCGAAGCGATTCGTCTGGGACGTCTGTTGGCCGAGCTGCTGCCTGATCCCGAGGTACTCGGACTGCTGGCGTTGATGCTGCTCCACGATTCACGTCGAGCTGCCCGGCTTTCGGTTGAAGGCGACATCGTGCTGCTCGAGGAGCAGGATCGCTCGCTGTGGGATCGCGACGAGATCGCTGAAGGCGTGGCGCTGGTCGAGCGCGCGCTCGCGAGCCGCAGAGTCGGGCCGTATCTGCTCCAGGCGGCGATCGCCGCCGTGCATGCTGATGCGACTAGTCCCGCGAAAACGGACTGGTACGAGATCGTCGGGCTCTACGACGTGCTCTTACGGATGGATCCGTCGCCGGTCGTCGAGCTGAATCGCGCGGCCGCGATCGCGATGCGCGACGGTCCGGCCGCCGGCTTGGCACTGATCGACGCCATTCTCGCGCGGGGTGATCTCACCGACTACAACCACGCGCATTCGGCGCGAGGGGAATTGTTGCGGCGGCTCAAGCGGCTGGGCGAGGCGAGCGCGGCCTACAAGCGAGCACTCCAGCTCGTCACGCAAGACGCTGAACGGCGGTTCCTCGAAGGACGACTCGAGAGCTTACAACAGCCACTCGATCGGTAG
PROTEIN sequence
Length: 411
MGLGRSAPGVGQDLIDTIESVYRAESRRVLATLIRLLGDFDLAEEALQEAFAAAVEKWPTEGIPSNPRAWLVSTGRFKAIDRLRRSQREVSEEHGVPQAAAEYKEVADDELRLIFTCCHPALSPDAQVALTLREVCGLTTEEIARAFLTTAPTVAQRIVRAKGKIKGAGIPYEVPALSDLPERLDAVLRVVYLVFNEGYRFRHDLSGEAIRLGRLLAELLPDPEVLGLLALMLLHDSRRAARLSVEGDIVLLEEQDRSLWDRDEIAEGVALVERALASRRVGPYLLQAAIAAVHADATSPAKTDWYEIVGLYDVLLRMDPSPVVELNRAAAIAMRDGPAAGLALIDAILARGDLTDYNHAHSARGELLRRLKRLGEASAAYKRALQLVTQDAERRFLEGRLESLQQPLDR*