ggKbase home page

13_2_20cm_scaffold_1897_12

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 12864..13466

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 197.0
  • Bit_score: 255
  • Evalue 6.20e-65
Lipopolysaccharide transport periplasmic protein LptA id=4810649 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 158.0
  • Bit_score: 234
  • Evalue 1.00e-58
lptA; lipopolysaccharide ABC transporter periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 176.0
  • Bit_score: 110
  • Evalue 4.90e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGACCCGGCTGGCCGCGCTCGCGGGCGCCGCCATGATCCTGACGCTGCCGGTGGCGGCCGCCGCCCAGGCGCCCGCGAAGCCCGCGGAGCCGGCGCGCAAGCAGCAGGGCAAGGACGATCGCACGCAGCCGGTCACCGTGGACGCGGACAAGATGGAGCGCTTCGGCAAGGAAGCGCTCGTGGTCTTCACCGGCAACGTCATCGCCCGCCAGAACAACTCCGTGCAGTACGCCGATCGCATGGAGGTCTACTTCGACGAGCACGGCGACCGCATTCTCCGGACCGTGTCCACGGGCTCGGTGCGCATCATCACGCGCGACTGCCGCACCGGCACCGCGCGACGCGCCGAATACTACGACCTCGAGCAGCGCGTCGTCCTCCTCGGCGACGCGCGCGTGTGGCAAGAGGACAACGTCGTGAGCGGCGAGAGCATCACGATCTTCCTGTCGCAGGATCGCTCGGTCGTGCAGGGCGGGCGGCAGGAGCGGGTGAAGGCCGTGTTCTACCCGAAAGACGAGAAGAAAGACGAGAAGAAGGACGAGAAGAAGGACGGGCAGGTCACCGCCGCCGCGCGGTCCTCGTCGCCGACCTGCGAGAATTGA
PROTEIN sequence
Length: 201
MTRLAALAGAAMILTLPVAAAAQAPAKPAEPARKQQGKDDRTQPVTVDADKMERFGKEALVVFTGNVIARQNNSVQYADRMEVYFDEHGDRILRTVSTGSVRIITRDCRTGTARRAEYYDLEQRVVLLGDARVWQEDNVVSGESITIFLSQDRSVVQGGRQERVKAVFYPKDEKKDEKKDEKKDGQVTAAARSSSPTCEN*