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13_2_20cm_scaffold_302200_1

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 2..340

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A692_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 112.0
  • Bit_score: 195
  • Evalue 2.30e-47
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 112.0
  • Bit_score: 200
  • Evalue 1.00e-48
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 112.0
  • Bit_score: 195
  • Evalue 6.50e-48

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 339
AACACGGGCGACGTGCGGCTCGATGCGCCGCTCGATCCCGACGGCGACCGCTCGCTGATCGAGCGCTTCATCGCCGAGGATCTCCCCGACACCGAAGATCAGGCGATGGACCGGTTCCTGTCGGACGAAATCGAGCAGGCGCTGAACACGTTGCAGCGCCGCGACGCCAAGGTGTTGCGTCTGTACTTCGGGCTGGACGGCGGCCGCGAGCATACACTCGAAGAGATCGGTGGGATGCTCGGTGTGACGCGCGAGCGCGTGCGCCAACTGCGGGACCGCGCGCTCAAGCGGCTGCGGGATGGAGAGGTGGGGAAGGCGCTCGCGAGCTTTGCGGCGTAA
PROTEIN sequence
Length: 113
NTGDVRLDAPLDPDGDRSLIERFIAEDLPDTEDQAMDRFLSDEIEQALNTLQRRDAKVLRLYFGLDGGREHTLEEIGGMLGVTRERVRQLRDRALKRLRDGEVGKALASFAA*