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13_2_20cm_scaffold_652_13

Organism: 13_2_20cm_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: 11691..12332

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 199.0
  • Bit_score: 243
  • Evalue 3.40e-61
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14429413 bin=bin3_NC10 species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 197.0
  • Bit_score: 151
  • Evalue 1.20e-33
putative RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 195.0
  • Bit_score: 147
  • Evalue 3.90e-33

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 642
GTGGACGGCGACATCGAGCTTCGGCTCGTGGAGCGCCTGCAGGCGGGCGACGCCACTGCGCTCGAAGGCCTCATGGAGCGCTATTCGTCCAGGCTCTACAGGCTCGCCTTCGGCATCACGCGCAATGCCCGCGACGCCGAGGAGGTCTTGCAGGACGTGTTCCTCACCGTCTTTCGCAAGATCGGCTCGTTCGAGCGGCGCGCGAAGCTCGGCACGTGGCTGTATCGCGTCGCGACGAACACCGCGCTGAACAAGCGGCGAGGCCTGGCCGCGACCGTCGAGGTGCCGCTGGACGATCTGCTGCCAACCTACCTGGACGACGGCCACCGGGCCGGCGACCGCTCCTTCCTCCTCACTGACTGGTCGGAGACTCCCGAGGAAGAGCTGCTGGCCGGGGAGGGACGGGCGGCGCTGGATCGGGCCCTGGCCATGCTGCCCGACGGCTATCGCGCCGTGCTCGTCCTGCGCGACGTCGATGGGCTGTCGACCGAGGAGGCCGCCGACGCGCTCGGCGAATCGGTGTCCTCGGTGAAGTCACGGCTGCACCGCGCCCGCATGGCGCTCCGCGAGATCATCACGCGTTCGCTGGCACCGAAGCACGCGCCGGCGCTGCCCCGCGGTGAGGTTTCCCGGCCTGCGTGA
PROTEIN sequence
Length: 214
VDGDIELRLVERLQAGDATALEGLMERYSSRLYRLAFGITRNARDAEEVLQDVFLTVFRKIGSFERRAKLGTWLYRVATNTALNKRRGLAATVEVPLDDLLPTYLDDGHRAGDRSFLLTDWSETPEEELLAGEGRAALDRALAMLPDGYRAVLVLRDVDGLSTEEAADALGESVSSVKSRLHRARMALREIITRSLAPKHAPALPRGEVSRPA*