ggKbase home page

NECEvent2014_4_7_scaffold_722_6

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA_28_22

near complete RP 48 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 16 / 38 MC: 3
Location: 5518..6213

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-K factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HET3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 231.0
  • Bit_score: 410
  • Evalue 9.40e-112
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 231.0
  • Bit_score: 409
  • Evalue 3.80e-111
sporulation sigma factor SigK similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 231.0
  • Bit_score: 372
  • Evalue 8.00e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 696
GTGTTTTTTTTAGCTAATATTTTAGAATTGCTTTGTAATTCAGTATTTTTAACTGGGTATATTACGGGCAACAATACATTTCCCAAGCCCCTTGATGAAGAAGAAGAGGAGCGCTATTTAAGACTATTTAAAGAAGGTGACAAAGAAGCTAAAAGCATATTAATTGAAAGAAATTTAAGATTAGTTGCCCATATTGTAAAAAAATATAATTTCCCAAACAAAGATATAGATGAATTAATATCTATAGGCACAGTTGGGCTAATTAAAGCTATAGATTCTTTTGATTCCGGAAAAGGAACAAGACTTGCAACATATGCTTCAAGGTGTATTGAAAATGAAATTCTCATGCTTTTTAGAAATAATAAAAAGCAAAAAAATGAAGTTTACCTTCAAGATCCAATAGGAGTTGATAAAGAAGGAAATGAGATTTGTTTAATAGATGTATTAAGTAGTGAGAGAGATTCTGTACTTGAAAAGGTTGAAAGTAACTTACAAATAAGACAGCTTTATAAAAAAATTGGTGCCTCTCTTACTGAAAGAGAAGGGGCTATATTAAAAATGAGGTATGGACTTATAGATGGATTGTGTCGTACTCAAAGAGAAATAGCAGTACTTTTAGGAATATCAAGGTCATATGTTTCTAGAATTGAAAAAAAAGCTTTGAAAAAGCTTAAAAAGGAATTGTCAAATAAATAG
PROTEIN sequence
Length: 232
VFFLANILELLCNSVFLTGYITGNNTFPKPLDEEEEERYLRLFKEGDKEAKSILIERNLRLVAHIVKKYNFPNKDIDELISIGTVGLIKAIDSFDSGKGTRLATYASRCIENEILMLFRNNKKQKNEVYLQDPIGVDKEGNEICLIDVLSSERDSVLEKVESNLQIRQLYKKIGASLTEREGAILKMRYGLIDGLCRTQREIAVLLGISRSYVSRIEKKALKKLKKELSNK*