ggKbase home page

NECEvent2014_4_7_scaffold_454_3

Organism: NECEvent2014_4_7_Clostridium_7_2_43FAA-rel_28_17_lowerCov

near complete RP 48 / 55 MC: 6 BSCG 46 / 51 MC: 5 ASCG 15 / 38 MC: 2
Location: 1393..4041

Top 3 Functional Annotations

Value Algorithm Source
1A family penicillin-binding protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H2E7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 883.0
  • Bit_score: 1438
  • Evalue 0.0
  • rbh
1A family penicillin-binding protein {ECO:0000313|EMBL:EEH97464.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43 similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 883.0
  • Bit_score: 1438
  • Evalue 0.0
membrane carboxypeptidase MrcB similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 796.0
  • Bit_score: 792
  • Evalue 1.60e-226

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. 7_2_43FAA → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2649
ATGGCTAACAAAGATACTTCTAGAACAGAAAAAAGCCAAGCTAATGTTAAGAAAAATAAGAACAATAGCAAAAAAAGTAAGAAAAAAAATCAACCTAAATATAAGAAATTTTTGAAAGGTACATTTCTTGGGATACTAATTGCATTACTTCTATGCGTTGTAGTAGGACTTGGATATGTATTTGCAATTATAAAAAGTACTGAAGAATTAGATGTTAATGCAGTTTTAAGCTTAAATGAACCTTCTATGCTTTTTGATAACCAAGGAACATATATTGATAATTTACCTACTGACGAAGAAAGATATAAAGTAAGTTTAGATGAAATGTCCGACTATCTTAAAGATGCTTATATTGCCATAGAAGATGAGCGTTTCTACTCTCATCCTGGTATTGATATAAAAAGAACTTTAGGATCTGCCTTAAGATCTGGTATTTATTATTTTACTGGAAAAGGTTCAGTTCAAGGTGGTTCAACTTTAACTCAGCAATTAATTAAAAATACATTATTAACAAATGACGTAAAAATAGAAAGAAAAGTTAGAGAAATTTATCTTTCATTAAGTCTAGAAAAGAAATTATCTAAGGATCAAATATTAGAAGCATATTTAAACACTATTCCTTTAGGCGGCAAGGTTTATGGTGTTGAAGCTGCTGCAAAGTACTACTTTGAAAAAAGTGCTAAAGACTTAAGCTTAGCAGAATCTGCATTTATAGCTGGATTAACTCAAGCACCTTCTGCTTACAGTCCATATGATCCAGAGAATATAAAGGATCCTAGTATTTACTTAGATAGAACTAAAACAGTTCTTATGAAAATGAAGGATTTAGGAAAAATAACTCAAGAAGAATATGATGAAGCTTATGCTTTTGTTGATGCAAATCAATTTGCATTTTCTCAAACAGTTATTACTTATAAAATAAACTATGAATGGTTTGTATATCCTGCAATCGATCAAGTAAGAGAAGATTTAAAAGAAACATACAAATACACTGATGAAGAAGTTGATAGATTATTCTCTACAGGTGGACTTAAAATATATACTACTATGGATAGAGCAATGCAAGATTCTACTCAAGCAGTTTTAAATGATAGAAGTAGTATTCAACAACTTGATATTTATGCTAACCCAGAAGTTACTGATGAAAATGGTACTCCTGCTCTTCAAGCAGCAGCTGCTATAATGGATTATAGAACAGGAGAAGTAAAAGTCTTAGTTGGTGGTAGAGGTGATCAGCCTGCAAGATCTACTAATAGAGCCTATTATGCTTTAAGATCTATAGGTTCTACTACTAAACCTTTGACAGTTTATGGACCTGCTATAGATACCAGAGCTGTAACTGCTGGAACAGTTTTTGATGATGCTTTATTGCCTTCTTCAATTAGTGCTAAGTATAATAATTATAATCCTCAAAACTGGAACTTTAAATCAGATGGATATATTACAGCTAGAGAATCCATTGCATTATCTAAAAATGTACCTACTATTATGATTGAAGATAAACTAGGTATTGAAAATGGATTATCCTATGGTGAAAAATTAGGTTTAGTATATGGTGATGAATCAAAAACTTTATCAACATTATCTCTTGGTGAATTTCATGAGGTATACGATGATGGTTCTAAAGATGGTGGAAACCCATTTATATTAGCTTCAGCCTATGCTACATTTGGTAATAATGGTTTATATACAGAGCCTATGTTATACACTAAAGTTGTAGATGGTAGTGGAAAAGTATTATTAGAAAAGACACCTAAACAAGAACAAATTTTTTCTCCACAAACTGCATATATTATGAGAGATTTACTTAAAGGGCCTTTATCTTTTGATGGCGCTTTAGCAAAGCTTCCTAATATGCCTGTAATAGGTAAAACAGGTACAACAAACTCAGTTACAGATTTCTTATTTGCTGGATTAACTCCTTATTATTCAGGAGCTGTTTGGATTGGTTATGATAACCGTAGTGCAATGGGTGGAGCAAGTTACAGTTCTTCTGCTGCTTCTCTATGGGGTGCCGTTATGGCTCCAATTCATGCTGATTTAGAATATAAAGAATTTGATGGAAATCCTGGTGGAGTTACAACTGTTACAATTTGTAAAGATTCTGGTAAGAGAGCAACTGACCTTTGTTCACATGATCAAAGAGGCTCAAGAGTTTACACAGAAATGTTTATATCTGGAACAGAACCTTCAGGAGTATGTGATGTTCACGTATCAGCTAAAGTTAATAAAAATAATAATAAGTTAGCTACAGAAAATACTCCAAAGGATTTAGTTGAAGAAAAAGTATTTATTAAGAAAGAAAATGCATATAAAAATGCTGCTGATTATAAATATGTTTTACCAACAGAAAAGGATGATACAAAGGCTCCTGAAAAAATTGAAGAGTTTAAATTATCAGACTTAGGAATTAAAGTTGGTACTAATGCAGATGATGCAATAAATCTTCTAAAATCTAAAGGAGTTAATGTTACTATTAAAAATAATGATTCTAAAAATAGAACTATTAAAACCATCTCCTCTGATAAAGCTAAAAAGGGCGATACTATAGTTATAGAACTAGAGGCAGAAACTCCTAATAATAATAATAATAATAATAATAATGAAGAACCAAACGAAAACGGAGAAACAGAATCTCCTAATGAATAA
PROTEIN sequence
Length: 883
MANKDTSRTEKSQANVKKNKNNSKKSKKKNQPKYKKFLKGTFLGILIALLLCVVVGLGYVFAIIKSTEELDVNAVLSLNEPSMLFDNQGTYIDNLPTDEERYKVSLDEMSDYLKDAYIAIEDERFYSHPGIDIKRTLGSALRSGIYYFTGKGSVQGGSTLTQQLIKNTLLTNDVKIERKVREIYLSLSLEKKLSKDQILEAYLNTIPLGGKVYGVEAAAKYYFEKSAKDLSLAESAFIAGLTQAPSAYSPYDPENIKDPSIYLDRTKTVLMKMKDLGKITQEEYDEAYAFVDANQFAFSQTVITYKINYEWFVYPAIDQVREDLKETYKYTDEEVDRLFSTGGLKIYTTMDRAMQDSTQAVLNDRSSIQQLDIYANPEVTDENGTPALQAAAAIMDYRTGEVKVLVGGRGDQPARSTNRAYYALRSIGSTTKPLTVYGPAIDTRAVTAGTVFDDALLPSSISAKYNNYNPQNWNFKSDGYITARESIALSKNVPTIMIEDKLGIENGLSYGEKLGLVYGDESKTLSTLSLGEFHEVYDDGSKDGGNPFILASAYATFGNNGLYTEPMLYTKVVDGSGKVLLEKTPKQEQIFSPQTAYIMRDLLKGPLSFDGALAKLPNMPVIGKTGTTNSVTDFLFAGLTPYYSGAVWIGYDNRSAMGGASYSSSAASLWGAVMAPIHADLEYKEFDGNPGGVTTVTICKDSGKRATDLCSHDQRGSRVYTEMFISGTEPSGVCDVHVSAKVNKNNNKLATENTPKDLVEEKVFIKKENAYKNAADYKYVLPTEKDDTKAPEKIEEFKLSDLGIKVGTNADDAINLLKSKGVNVTIKNNDSKNRTIKTISSDKAKKGDTIVIELEAETPNNNNNNNNNEEPNENGETESPNE*