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NECEvent2014_6_7_scaffold_46

Alias: 176_007_scaffold_46

Search features with annotation key words

Displaying items 31-60 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_46_31
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34465..35235)
DNA (771bp) protein (257aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=632245
lgt2; prolipoprotein diacylglyceryl transferase 2 (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=3 Tax=Clostridium butyricum RepID=B1R1W5_CLOBU
NECEvent2014_6_7_scaffold_46_32
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35333..35881)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNY8_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41152.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_7_scaffold_46_33
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35917..37224)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2THX6_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:KJU71939.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_6_7_scaffold_46_34
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(37343..38191)
DNA (849bp) protein (283aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LPG9_CLOB8
ksgA; dimethyladenosine transferase
NECEvent2014_6_7_scaffold_46_35
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38195..38761)
DNA (567bp) protein (189aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
Ribonuclease M5 n=1 Tax=Clostridium colicanis 209318 RepID=N9WBK4_9CLOT
putative primase-like protein
NECEvent2014_6_7_scaffold_46_36
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38852..39898)
DNA (1047bp) protein (349aa)
3D/G5 domain protein n=2 Tax=Clostridium botulinum B RepID=B2THX3_CLOBB
3D domain protein {ECO:0000313|EMBL:AIY80696.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
3D/G5 domain protein
NECEvent2014_6_7_scaffold_46_37
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40142..40939)
DNA (798bp) protein (266aa)
Hydrolase, TatD family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAW5_9CLOT
Hydrolase, TatD family {ECO:0000313|EMBL:EKQ56019.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26
TatD family hydrolase
NECEvent2014_6_7_scaffold_46_38
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41065..41508)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q3D6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY22122.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_6_7_scaffold_46_39
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41995..43623)
DNA (1629bp) protein (543aa)
metG2; methionine--tRNA ligase MetG (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN78_CLOSA
Suspect SCG annotation. See neighboring gene [NECEvent2014_6_7_scaffold_46_40].
NECEvent2014_6_7_scaffold_46_40
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(43776..45707)
DNA (1932bp) protein (644aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
metG; methionine--tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENN3_9CLOT
NECEvent2014_6_7_scaffold_46_41
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46159..46656
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XXQ8_9CLOT
fusaric acid resistance family protein
Fusaric acid resistance family protein {ECO:0000313|EMBL:AIY84683.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii
NECEvent2014_6_7_scaffold_46_42
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46754..47209
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HID0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99405.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_7_scaffold_46_43
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47322..49043)
DNA (1722bp) protein (574aa)
Na+/H+ antiporter family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK34_9CLOT
na+/H+ antiporter family protein
Na+/H+ antiporter family protein {ECO:0000313|EMBL:AIY84867.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str.
NECEvent2014_6_7_scaffold_46_44
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49402..51024)
DNA (1623bp) protein (541aa)
ABC1 family protein kinase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UXB7_CLOBA rbh
ABC1 family protein kinase
Protein kinase {ECO:0000313|EMBL:KIL08423.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_7_scaffold_46_45
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51091..51417)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKS9_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41143.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_7_scaffold_46_46
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51478..52746)
DNA (1269bp) protein (423aa)
Peptidase M24 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBZ2_9CLOT
Peptidase M24 {ECO:0000313|EMBL:KJU72001.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_6_7_scaffold_46_47
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52822..54453)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MNL7_9CLOT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56311.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_6_7_scaffold_46_48
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54446..55171)
DNA (726bp) protein (242aa)
ABC-type transporter ATP-binding protein EcsA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRQ7_CLOSA rbh
ecsA; ABC-type transporter ATP-binding protein EcsA
ABC-type transporter ATP-binding protein EcsA {ECO:0000313|EMBL:AGX43203.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_6_7_scaffold_46_49
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55228..55752)
DNA (525bp) protein (175aa)
Spore maturation protein B n=1 Tax=Clostridium sp. CAG:221 RepID=R6G3M2_9CLOT
Spore maturation protein B {ECO:0000313|EMBL:CDB16064.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostrid
hypothetical protein
NECEvent2014_6_7_scaffold_46_50
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55765..56340)
DNA (576bp) protein (192aa)
Putative spore maturation protein A n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK39_9CLOT
Putative spore maturation protein A {ECO:0000313|EMBL:EKY27947.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM
spmA; spore maturation protein A
NECEvent2014_6_7_scaffold_46_51
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

56452..56637
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WBL8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00411.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_6_7_scaffold_46_52
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56725..58098)
DNA (1374bp) protein (458aa)
MATE efflux family protein n=2 Tax=Turicibacter RepID=D4W515_9FIRM rbh
Multidrug transporter MatE {ECO:0000313|EMBL:KJU71914.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
MATE efflux family protein
NECEvent2014_6_7_scaffold_46_53
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58101..58559)
DNA (459bp) protein (153aa)
TrmB family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI000289E8CE
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGX41137.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DS
NECEvent2014_6_7_scaffold_46_54
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58656..59654)
DNA (999bp) protein (333aa)
Putative HTH-type transcriptional regulator RegA n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FPT6_9CLOT
Putative HTH-type transcriptional regulator RegA {ECO:0000313|EMBL:CDG02769.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
regA1; HTH-type transcriptional regulator RegA
NECEvent2014_6_7_scaffold_46_55
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59848..62961)
DNA (3114bp) protein (1038aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FSC2_9CLOT rbh
NECEvent2014_6_7_scaffold_46_56
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63511..63729
DNA (219bp) protein (73aa)
BFD/(2Fe-2S)-binding domain-containing protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CB76_9CLOT
BFD/(2Fe-2S)-binding domain-containing protein {ECO:0000313|EMBL:EOR26562.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
hypothetical protein
NECEvent2014_6_7_scaffold_46_57
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63870..65180)
DNA (1311bp) protein (437aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
Aspartokinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TV36_9CLOT
aspartate kinase
NECEvent2014_6_7_scaffold_46_58
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

65359..66534
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGW3_9CLOT
SAM-dependent methyltransferase {ECO:0000313|EMBL:KJU71908.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
N2,N2-dimethylguanosine tRNA methyltransferase family protein
NECEvent2014_6_7_scaffold_46_59
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66567..67163)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2NHR4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK28411.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
NECEvent2014_6_7_scaffold_46_60
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67318..68028)
DNA (711bp) protein (237aa)
Probable 2-phosphosulfolactate phosphatase {ECO:0000256|HAMAP-Rule:MF_00490}; EC=3.1.3.71 {ECO:0000256|HAMAP-Rule:MF_00490};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost
Probable 2-phosphosulfolactate phosphatase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=COMB_CLOBA
2-phosphosulfolactate phosphatase
Displaying items 31-60 of 77 in total

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