ggKbase home page

NECEvent2014_6_7_scaffold_122

Alias: 176_007_scaffold_122

Search features with annotation key words

Displaying items 31-60 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_7_scaffold_122_31
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20400..21476)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Brevibacillus brevis RepID=UPI00036C8FEE
Uncharacterized protein; TaxID=1306409 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DKU-01.;"
NECEvent2014_6_7_scaffold_122_32
unknown

Not on your lists

comp(21569..22300)
DNA (732bp) protein (244aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_122_33
unknown

Not on your lists

comp(22428..22616)
DNA (189bp) protein (63aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_122_34
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22629..23501)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TRN1_CLOBB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD22725.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
NECEvent2014_6_7_scaffold_122_35
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23589..23843)
DNA (255bp) protein (85aa)
Putative transcriptional regulatory protein n=2 Tax=Clostridium botulinum B RepID=B2TRN2_CLOBB
transcriptional regulatory protein
Putative helix-turn-helix DNA binding protein {ECO:0000313|EMBL:CDH91295.1}; Putative transcriptional regulatory protein {ECO:0000313|EMBL:ACD21760.1}; TaxID=935198 species="Bacteria; Firmicutes; Clos
NECEvent2014_6_7_scaffold_122_36
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23923..24756)
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TRN3_CLOBB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD24566.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
NECEvent2014_6_7_scaffold_122_37
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24833..25324)
DNA (492bp) protein (164aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TRN4_CLOBB
hypothetical protein
Putative phage protein {ECO:0000313|EMBL:CDH91297.1}; Uncharacterized protein {ECO:0000313|EMBL:ACD24903.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
NECEvent2014_6_7_scaffold_122_38
unknown

Not on your lists

comp(25718..25906)
DNA (189bp) protein (63aa)

This feature has no annotations

NECEvent2014_6_7_scaffold_122_39
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26298..26960)
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=U2D921_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE04562.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffic
NECEvent2014_6_7_scaffold_122_40
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27318..27767)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M131_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI99755.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
restriction endonuclease-like protein
NECEvent2014_6_7_scaffold_122_41
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28232..29179)
DNA (948bp) protein (316aa)
Phage integrase family protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ELR4_CLOPA rbh
Uncharacterized protein {ECO:0000313|EMBL:KIL09760.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
phage integrase family protein
NECEvent2014_6_7_scaffold_122_42
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29317..30318)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS69_CLOBU rbh
No significant {ECO:0000313|EMBL:KJZ85324.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
GGGtGRT protein
NECEvent2014_6_7_scaffold_122_43
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30344..31036)
DNA (693bp) protein (231aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS70_CLOBU rbh
Zinc finger domain {ECO:0000313|EMBL:KJZ97421.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_6_7_scaffold_122_trna_1
unknown

Not on your lists

31458..31541
DNA (84bp)
transferRNA
NECEvent2014_6_7_scaffold_122_44

Not on your lists

comp(31769..32029)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ATJ2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ21945.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
NECEvent2014_6_7_scaffold_122_45
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32043..33299)
DNA (1257bp) protein (419aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AG60_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35363.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_7_scaffold_122_46

Not on your lists

comp(33466..33699)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ20797.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_6_7_scaffold_122_47

Not on your lists

33731..34306
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FB39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ20799.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_6_7_scaffold_122_48
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34360..35211)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ARH4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35364.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_6_7_scaffold_122_49

Not on your lists

35474..36070
DNA (597bp) protein (199aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z6P3_CLOBU rbh
Sigma-70 region 2 protein {ECO:0000313|EMBL:ETJ20801.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
sigma-70 region 2 domain-containing protein
NECEvent2014_6_7_scaffold_122_50
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(36113..36511)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1D2Q4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO62174.1}; TaxID=742743 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister succinatiphilus YIT 1
transposase C for
NECEvent2014_6_7_scaffold_122_51
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36632..38476)
DNA (1845bp) protein (615aa)
Site-specific recombinase, phage integrase family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDP5_CLOPF rbh
Site-specific recombinase, phage integrase family protein {ECO:0000313|EMBL:EDT27943.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
integrase family protein
NECEvent2014_6_7_scaffold_122_52
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38463..40298)
DNA (1836bp) protein (612aa)
Transposase B for n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RDP6_CLOPF rbh
Transposase B for {ECO:0000313|EMBL:EDT28065.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
transposase
NECEvent2014_6_7_scaffold_122_53
Dialister succinatiphilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(40466..41587)
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Dialister succinatiphilus YIT 11850 RepID=H1D2P9_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EHO62169.1}; TaxID=742743 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister succinatiphilus YIT 1
transposase A
NECEvent2014_6_7_scaffold_122_54
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41833..42276)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M9C1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ01988.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
NECEvent2014_6_7_scaffold_122_55
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(42361..44367)
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD045 RepID=J8EFH1_BACCE rbh
Uncharacterized protein {ECO:0000313|EMBL:EJR29734.1}; TaxID=1053225 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD045.;
hypothetical protein
NECEvent2014_6_7_scaffold_122_56
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(44628..46508)
DNA (1881bp) protein (627aa)
Peptidase S24/S26A/S26B, conserved region n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TBZ8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ40483.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 107762.
peptidase S24
NECEvent2014_6_7_scaffold_122_57
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46510..46872)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MXH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75750.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
NECEvent2014_6_7_scaffold_122_58
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46968..48857)
DNA (1890bp) protein (630aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2N3F3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK30022.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
NECEvent2014_6_7_scaffold_122_59
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49287..50426)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0TUH8_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26605.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
Displaying items 31-60 of 119 in total

View Taxonomy