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NECEvent2014_8_3_scaffold_1227_1

Organism: NECEvent2014_8_3_Enterobacteriales_53_8_partial

partial RP 3 / 55 MC: 1 BSCG 3 / 51 ASCG 6 / 38 MC: 1
Location: 3..254

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=2 Tax=Escherichia coli RepID=N3QVE9_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 163
  • Evalue 9.50e-38
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 163
  • Evalue 2.70e-38
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 83.0
  • Bit_score: 163
  • Evalue 1.30e-37

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
CCGCTGGACTCTGCCACCACCGAGAGCCTGCGTGCCGCAACGCACGACGTTCTGGCTGGCCTGACCGCCCGTGAAGCAAAAGTGCTGCGTATGCGTTTCGGTATCGATATGAATACCGACCACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGTAAACTGCGCCATCCAAGCCGCTCTGAGGTTCTGCGTAGCTTCCTCGACGATTAA
PROTEIN sequence
Length: 84
PLDSATTESLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD*