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NECEvent2014_5_8_scaffold_78_28

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(23197..23529)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain-containing protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTE5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 92.0
  • Bit_score: 98
  • Evalue 5.00e-18
Uncharacterized protein {ECO:0000313|EMBL:KIN79938.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 93.0
  • Bit_score: 162
  • Evalue 3.90e-37
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 97.0
  • Bit_score: 91
  • Evalue 1.30e-16

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 333
ATGCCATTTCATAAGGTGGATCCAGAAGAAGAGATTAAAAAATCGATTGAAAGATATCCAGGATTAGAAATTTATATGAAGCAAGTTGATGCTCAATATAAATTGATTGAATCATTAGTTAAATTTAGAGAATCTACTGGAATAACTCAGAAAGAAGTTGCGGAAAGAAGTGGATTAACTCAACAGATGGTTTCAAGGATGGAGAAAATTGATAACTCTCCAACATTAGATACTTTTTTAAGGTATGTATTGGCTTTAGGATTAGAACTAAAGCTTGATGGATCTAACGTATTTGGAGCAGGTAATGGGGAAGAAGCTTGTTGCGTAGTTTAG
PROTEIN sequence
Length: 111
MPFHKVDPEEEIKKSIERYPGLEIYMKQVDAQYKLIESLVKFRESTGITQKEVAERSGLTQQMVSRMEKIDNSPTLDTFLRYVLALGLELKLDGSNVFGAGNGEEACCVV*