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NECEvent2014_5_8_scaffold_430_12

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(15129..16028)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1379739 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 299.0
  • Bit_score: 596
  • Evalue 2.90e-167
RluA family pseudouridine synthase (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 300.0
  • Bit_score: 555
  • Evalue 6.60e-156
Pseudouridine synthase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SZ39_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 299.0
  • Bit_score: 589
  • Evalue 1.90e-165
  • rbh

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 900
ATGAATAATAAATTAATTTTTGTAGTTAAAGAAATAAATCACAATATTGATATAAAAGATTATTTAAAAGAAATAGAAAATTTATCAGGAAGATTTGTTAGGAAAGCTGTTAGGGATGGAAGAATTTTTGTGAATGGGGAAAAAGTAATAAAGAAGCACAAATTGTCACAGGATGATTTAATAGAAATTTATATGCAAGAAGATGAGCATCAAAATATAGAGCCAGAAGATATAAATATAGAAATAGTGTATGAAGATAGTGACATTATAGTTATAAACAAAAAACCTGGTATAGTAGTACATCCTACTAAAAGTCACCCTACAGGAACTTTATCTAATGGAATATTATATCATTTTAAGAAAAAGGGAGAAAGATCTATAGTAAGATTAGTTAATAGATTAGATAGAGATACATCTGGGTTAGTAATAGTAGCTAAAAATCAGTTTTCACATATGAGATTAGCTTCAGACATGAGTAAAGATAGTTTTAGGAAAATATATATAGCAGTAGTGCATGGAAGTATGAAAGAAAAAGAGGGAAGGATTAATTTACCTATATATAAAGAAGAAAATGAATCTATTAAAAGAATAGTAGATGAGAGAGGACAAGAAAGTATAACTACATATGAGGTTTTAGAAGAATTATCTAAAGGTAGTGTAGTTAAGTTAGAATTAGAAACGGGAAGGACTCATCAAATTAGAGTACATATGTCTCATTTAGGGCATCATCTTTATGGGGATTCCTTATATGGAATGGGAGAAGAAGAGAAAGAATACATAGAAAGGCAAGCCCTACACGCTTATAAATTAGAATTTCCACATCCTAGAACAGGAAATATTTTAAAATTACAATGTAGTTTACCAGAGGATATAAAAAAATTAATAGAAAAGATAAAATAA
PROTEIN sequence
Length: 300
MNNKLIFVVKEINHNIDIKDYLKEIENLSGRFVRKAVRDGRIFVNGEKVIKKHKLSQDDLIEIYMQEDEHQNIEPEDINIEIVYEDSDIIVINKKPGIVVHPTKSHPTGTLSNGILYHFKKKGERSIVRLVNRLDRDTSGLVIVAKNQFSHMRLASDMSKDSFRKIYIAVVHGSMKEKEGRINLPIYKEENESIKRIVDERGQESITTYEVLEELSKGSVVKLELETGRTHQIRVHMSHLGHHLYGDSLYGMGEEEKEYIERQALHAYKLEFPHPRTGNILKLQCSLPEDIKKLIEKIK*