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NECEvent2014_5_8_scaffold_848_2

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(378..1049)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-H factor n=17 Tax=Clostridium RepID=A7FZ86_CLOB1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 213.0
  • Bit_score: 417
  • Evalue 7.50e-114
  • rbh
RNA polymerase sigma-H factor {ECO:0000313|EMBL:EDU39021.1}; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes ATCC 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 223.0
  • Bit_score: 436
  • Evalue 2.80e-119
sigH; RNA polymerase factor sigma-70 similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 213.0
  • Bit_score: 417
  • Evalue 2.10e-114

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 672
GTGGTTATATTTATTTTGGGGGGGGATACCTTGGATAGAAAGGTTCAAATTAATAGTAAAACTTCCTCCTTTGAAGGATGTGTAGATGAGGAAATAGTTATGGAAGCCAAAGCAGGAAATTCTAGAGCACAAGAATATATAATTGGCAAGTATGAGAATTTTGTTAAAGCTAAGGCAAAATCTTATTTTTTAATAGGAGCAGATAAAGAAGATATATATCAAGAAGGTATGATAGGTCTATATAAAGCTATAAGAGACTTTAAACCGGATAAATTATCTTCCTTTAAAGCCTTTGCTGAGCTGTGTGTTACTAGACAAATTATAACGGCTATAAAAACAGCAACTAGACAAAAACACATTCCGCTTAACACATATGTTTCTTTAAATAAGCCAATATATGATGAGGAGTCAGATAGAACCTTATTGGATATTTTATCAGAAGCTAAAGTGGCTAATCCAGAGGAATTAATTATAAGTAGAGAAGAACTAAAGCATATACAAAATGAGATAGGCGAAGTATTATCAGATCTTGAAATGGAAGTTTTAATGTCTTATTTAGATGGAAAATCTTATCAAGAAATTGCCTGCGATTTAGATAGGCATGCTAAGTCTATAGACAATGCACTACAAAGAGTAAAAAGAAAATTAGAAAAATGCTTAAATAATAAATGA
PROTEIN sequence
Length: 224
VVIFILGGDTLDRKVQINSKTSSFEGCVDEEIVMEAKAGNSRAQEYIIGKYENFVKAKAKSYFLIGADKEDIYQEGMIGLYKAIRDFKPDKLSSFKAFAELCVTRQIITAIKTATRQKHIPLNTYVSLNKPIYDEESDRTLLDILSEAKVANPEELIISREELKHIQNEIGEVLSDLEMEVLMSYLDGKSYQEIACDLDRHAKSIDNALQRVKRKLEKCLNNK*