ggKbase home page

NECEvent2014_5_8_scaffold_1714_2

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(478..1350)

Top 3 Functional Annotations

Value Algorithm Source
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 290.0
  • Bit_score: 564
  • Evalue 9.00e-158
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SFH5_CLOSG similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 290.0
  • Bit_score: 564
  • Evalue 6.40e-158
  • rbh
pyridoxal biosynthesis lyase PdxS similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 290.0
  • Bit_score: 550
  • Evalue 2.10e-154

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 873
ATGGAAAAGAGACATGAATTAAACAAAAATTTAGCTCAAATGCTTAAGGGTGGAGTTATAATGGATGTTGTGAACCCAGAGCAAGCAAAAATTGCAGAAGAAGCTGGGGCTGTAGCTGTTATGGCATTAGAAAGGGTTCCATCAGACATTAGAAAACAAGGGGGAGTAGCTAGAACTTCCGATCCTAAGATGATAAAAGAAATAATAAATGCAGTTTCAATACCGGTTATGGCAAAGGTTAGAATAGGTCATTTTGTAGAAGCTCAAATATTAGAAGCTATAGGAGTAGATTATATAGATGAAAGTGAAGTTTTAACACCAGCAGATGATTTGTTCCATATAAATAAAAAAGATTTTAAAGTTCCTTTTGTTTGTGGCGCAAGAAATTTGGGAGAAGCTTTAAGAAGAATAGGAGAAGGAGCTTCTATGATAAGAACTAAAGGGGAAGCAGGTACAGGAAATGTAGTGGAAGCGGTAAGACATATGAGAACTATAAGCTCAGAAATGAGAAAACTGCAACTTACGCCAAAAGAAGAGTTAATGACTGCAGCTAAAGAAATGGGAGCACCATTTAATTTAGTAGAATATGTGGCAGAAAAGGGTAAACTTCCAGTAATAAATTTTGCAGCAGGTGGTATAGCAACACCAGCAGATGCAGCTTTAATGATGCAGTTAGGGTGTGATGGAATATTCGTAGGTTCTGGAATATTTAAATCAGATAATCCAGAAAAAAGAGCAAAAGCTATAGTTAAAGCAACAGCTTATTTTAAAGATCCAGAGGTTTTAGCTAAGGTTTCAGAGAACTTAGGAGGAGCAATGTCAGGTTTAGAAATTAGTAAGCTAGAAACAGAATTTGCTGAAAGAGGCTGGTAA
PROTEIN sequence
Length: 291
MEKRHELNKNLAQMLKGGVIMDVVNPEQAKIAEEAGAVAVMALERVPSDIRKQGGVARTSDPKMIKEIINAVSIPVMAKVRIGHFVEAQILEAIGVDYIDESEVLTPADDLFHINKKDFKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVRHMRTISSEMRKLQLTPKEELMTAAKEMGAPFNLVEYVAEKGKLPVINFAAGGIATPADAALMMQLGCDGIFVGSGIFKSDNPEKRAKAIVKATAYFKDPEVLAKVSENLGGAMSGLEISKLETEFAERGW*