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NECEvent2014_5_8_scaffold_1714_5

Organism: NECEvent2014_5_8_Clostridium_sporogenes-rel_28_12

near complete RP 51 / 55 MC: 4 BSCG 51 / 51 MC: 3 ASCG 15 / 38 MC: 1
Location: comp(2842..4416)

Top 3 Functional Annotations

Value Algorithm Source
DEAD-box ATP-dependent RNA helicase CshA {ECO:0000256|HAMAP-Rule:MF_01493}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_01493};; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 524.0
  • Bit_score: 1014
  • Evalue 4.50e-293
Cold-shock DEAD-box protein A n=2 Tax=Clostridium RepID=E8ZML2_CLOB0 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 524.0
  • Bit_score: 1014
  • Evalue 3.20e-293
  • rbh
cold-shock DEAD-box protein A similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 524.0
  • Bit_score: 1014
  • Evalue 9.10e-294
  • rbh

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Taxonomy

Clostridium sporogenes → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1575
ATGGAAAATAAAAACTTTGAAAATTTAAACTTAAATGAAGATGTACTAAAAGCTATACAACATATGGGATTTGAAACTCCATCTGCAATACAAGAAAAATCAATTCCAGTAGTATTAGAAGGAGCAGATGTTATAGCTCAAGCTCAAACAGGAACAGGCAAAACTTTAGCTTTTGGAGCTCCTGTAATAAGCACTTTATGTGACGAAGGAAAGAAAAAAGGCGTAAAAGCTTTAGTATTAACGCCTACAAGAGAATTAGCCCTTCAAATAAAGGATGAGTTAAAGAGATTATCTAAATATAGTAAAACAAAGGTACTTCCTGTTTATGGAGGAGAGTCTATAGAAAGACAAATAAAAGATATTAAAAGTGGAGTAGATATAGTGGTTGGGACTCCGGGAAGAGTATTAGACCATATTAATAGAAGAACTTTAAAACTTGGAGGTATTGATTTCCTAGTTTTAGACGAAGCAGATGAAATGCTTAATATGGGATTTATAGAAGATATAGAAACTATAATGGCAAGTACTCCTGAAGAAAAACAAACTATGCTTTTTTCAGCTACAATGCCAGCACCCATTAAAAAATTAGCTTTAAACTACATGAAAAAAGATGTAGAGCATATAGCTATATTAAAAAAATCTTTAACAGTAGATAAAATAGCACAACATTATTTTGCAGTGAAAAATAAGGATAAACTAGAAGCTATATGTAGGATAATAGATTCAGAAGAACCAGAAAGTGCTATAATATTTTGTAGAACAAAAAGAGGCGTTGATGAATTAGTTGAAGCTATGCAATCAAAGGGATACAATGTAGAAGGTATGCATGGAGACATGAGCCAAAATCAAAGAATAAATACTTTGAAAAAATTTAAAAAAGCTACCTTAAACTTTTTAGTTGCAACAGATGTAGCGGCTAGAGGTATAGACGTAGAAAATATATCTCATGTAATAAATTATGATATACCTCAAGATGCGGAATCCTATGTTCACAGAATAGGAAGAACAGGAAGAGCTGATAAAGAAGGAACAGCCTATTCTTTAGTTACCCCTAGAGAAGTATCTTCTATTAGACAAATAGAAAGAATAATTAAGAGCAAAATCACCAAAAAAGAATTACCTACTTTAGAGGATATATTAGAAAAGAAATACGATAATTTATTAAATGATATAACTTCTAAAATAGAAGAAAACAAATATGAAAAATTTATGCCAATGGTAAAAACTTTAGAACAAAACTTTGATTTATCTGAAGTGTCAGCAGCTTTAATGGAAATGTTATTTAGTAAAGAAATGAGCTTTGACTATACAAATGATAAATTAGAGGCAGAAGTGCCAGTAAGATTATTCTTAAGTGTAGGAAGAAAAGATAGTATAAATGTAAAAAGCTTATTAACATTTATTCAAGATGAAGCTTCTGTAAGAAATCATGAAATTGGAGATATAGACATATTAGATAAATTTACTTTTATGGATGTATCATCAAACACTGCAGAAAAAATAATAAATAAATGCTCAGGTAAAAAATTAAATAGAAGAAAAGTTAATATCGAGATAGCTAAAAGTAAAAAATAA
PROTEIN sequence
Length: 525
MENKNFENLNLNEDVLKAIQHMGFETPSAIQEKSIPVVLEGADVIAQAQTGTGKTLAFGAPVISTLCDEGKKKGVKALVLTPTRELALQIKDELKRLSKYSKTKVLPVYGGESIERQIKDIKSGVDIVVGTPGRVLDHINRRTLKLGGIDFLVLDEADEMLNMGFIEDIETIMASTPEEKQTMLFSATMPAPIKKLALNYMKKDVEHIAILKKSLTVDKIAQHYFAVKNKDKLEAICRIIDSEEPESAIIFCRTKRGVDELVEAMQSKGYNVEGMHGDMSQNQRINTLKKFKKATLNFLVATDVAARGIDVENISHVINYDIPQDAESYVHRIGRTGRADKEGTAYSLVTPREVSSIRQIERIIKSKITKKELPTLEDILEKKYDNLLNDITSKIEENKYEKFMPMVKTLEQNFDLSEVSAALMEMLFSKEMSFDYTNDKLEAEVPVRLFLSVGRKDSINVKSLLTFIQDEASVRNHEIGDIDILDKFTFMDVSSNTAEKIINKCSGKKLNRRKVNIEIAKSKK*