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NECEvent2014_5_8_scaffold_246

Alias: 175_008_scaffold_246

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_8_scaffold_246_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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237..827
DNA (591bp) protein (197aa)
Guanylate kinase, homolog n=2 Tax=Clostridium perfringens RepID=Q0TMK0_CLOP1 rbh
guanylate kinase
Guanylate kinase, homolog {ECO:0000313|EMBL:EDT22948.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. AT
NECEvent2014_5_8_scaffold_246_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

844..999
DNA (156bp) protein (52aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CZF6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26018.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_5_8_scaffold_246_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1156..1485
DNA (330bp) protein (110aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CZF5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82156.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_8_scaffold_246_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1507..2430
DNA (924bp) protein (308aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III subunit delta {ECO:0000313|EMBL:EIA15962.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EIA15962.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
Putative DNA polymerase III, delta prime subunit n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TMK3_CLOP1 rbh
NECEvent2014_5_8_scaffold_246_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2433..3338
DNA (906bp) protein (302aa)
PSP1 domain-containing protein n=10 Tax=Clostridium perfringens RepID=H7CZF3_CLOPF rbh
PSP1 domain-containing protein rbh
Signal peptidase-like protein {ECO:0000313|EMBL:BAB82154.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_5_8_scaffold_246_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3507..3677
DNA (171bp) protein (57aa)
Ferredoxin n=11 Tax=Clostridium perfringens RepID=FER_CLOPE
ferredoxin (fdxA)
Putative ferredoxin {ECO:0000313|EMBL:ABG86239.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 /
NECEvent2014_5_8_scaffold_246_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3794..5476
DNA (1683bp) protein (561aa)
Mur ligase family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R9Z3_CLOPF rbh
Mur ligase
Mur ligase family protein {ECO:0000313|EMBL:EDT22961.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. AT
NECEvent2014_5_8_scaffold_246_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5527..6180)
DNA (654bp) protein (218aa)
Putative zinc-dependent hydrolase n=1 Tax=Clostridium perfringens F262 RepID=H7CZF0_CLOPF rbh
Putative zinc-dependent hydrolase {ECO:0000313|EMBL:EIA15958.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F
zinc-dependent hydrolase
NECEvent2014_5_8_scaffold_246_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6397..6852
DNA (456bp) protein (152aa)
Transcriptional regulator CtsR n=10 Tax=Clostridium perfringens RepID=H7CZE9_CLOPF
transcriptional repressor
Transcriptional repressor {ECO:0000313|EMBL:EDT71230.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JG
NECEvent2014_5_8_scaffold_246_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6872..7399
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CZE8_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EIA15956.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_5_8_scaffold_246_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7383..8396
DNA (1014bp) protein (338aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=488537 species="Bacteria;
Putative ATP:guanido phosphotransferase HMPREF9476_02490 n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CVB9_CLOPF rbh
ATP:guanido phosphotransferase
NECEvent2014_5_8_scaffold_246_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8421..10871
DNA (2451bp) protein (817aa)
Negative regulator of genetic competence MecB/ClpC {ECO:0000313|EMBL:EDT22945.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT22945.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
clpC; negative regulator of genetic competence MecB/ClpC (EC:3.4.21.-)
Negative regulator of genetic competence MecB/ClpC n=2 Tax=Clostridium perfringens RepID=Q0TML1_CLOP1 rbh
NECEvent2014_5_8_scaffold_246_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11142..12080
DNA (939bp) protein (313aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Thioredoxin reductase n=10 Tax=Clostridium perfringens RepID=H7CZE5_CLOPF rbh
thioredoxin-disulfide reductase
NECEvent2014_5_8_scaffold_246_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12083..12316
DNA (234bp) protein (78aa)
YruB family glutaredoxin-like protein n=11 Tax=Clostridium perfringens RepID=H7CZE4_CLOPF
YruB family glutaredoxin-like protein
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:EDT26005.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_5_8_scaffold_246_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12333..13781
DNA (1449bp) protein (483aa)
gapN; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.9)
Glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent {ECO:0000313|EMBL:EDT71238.1}; EC=1.2.1.9 {ECO:0000313|EMBL:EDT71238.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales
Glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent n=3 Tax=Clostridium perfringens RepID=Q0TML4_CLOP1 rbh
NECEvent2014_5_8_scaffold_246_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13903..14130)
DNA (228bp) protein (76aa)
YruB family glutaredoxin-like protein n=10 Tax=Clostridium perfringens RepID=H7CZE2_CLOPF
glutaredoxin
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:EDT14437.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_5_8_scaffold_246_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14224..14388)
DNA (165bp) protein (55aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7CZE1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15949.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_8_scaffold_246_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14588..15316
DNA (729bp) protein (243aa)
GntR family transcriptional regulator n=4 Tax=Clostridium perfringens RepID=H7CZE0_CLOPF rbh
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:EIA15948.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_5_8_scaffold_246_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15307..16035
DNA (729bp) protein (243aa)
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000255|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000255|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000255|HAMAP-Rule:MF_01241}; Short=GNPDA {ECO:0000255|HAMAP-
Glucosamine-6-phosphate deaminase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=NAGB_CLOP1 rbh
NECEvent2014_5_8_scaffold_246_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16262..17647
DNA (1386bp) protein (462aa)
DNA repair protein radA n=3 Tax=Clostridium perfringens RepID=B1BV32_CLOPF rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG
radA; DNA repair protein RadA
NECEvent2014_5_8_scaffold_246_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17667..18731
DNA (1065bp) protein (355aa)
DNA integrity scanning protein DisA n=9 Tax=Clostridium perfringens RepID=DISA_CLOPE rbh
DNA integrity scanning protein DisA
DNA integrity scanning protein DisA {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00010389}; Cyclic di-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01438}; Diadenylate cyclase {ECO:0000256|HAMAP-R
NECEvent2014_5_8_scaffold_246_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18765..19166)
DNA (402bp) protein (134aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XHQ1_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82137.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_5_8_scaffold_246_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19433..20584
DNA (1152bp) protein (384aa)
PIN/TRAM domain protein n=4 Tax=Clostridium perfringens RepID=H7CZD5_CLOPF rbh
PIN/TRAM domain-containing protein
PIN/TRAM domain protein {ECO:0000313|EMBL:EIA15943.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_5_8_scaffold_246_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20598..21275
DNA (678bp) protein (226aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=8 Tax=Clostridium perfringens RepID=ISPD_CLOP1 rbh
NECEvent2014_5_8_scaffold_246_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21630..23342
DNA (1713bp) protein (571aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01569}; EC=6.1.1.15 {ECO:0000255|HAMAP-Rule:MF_01569};; Prolyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01569}; Short=ProRS {ECO:0000255|HAMAP-Rule:MF
Proline--tRNA ligase n=3 Tax=Clostridium perfringens RepID=SYP_CLOP1 rbh
NECEvent2014_5_8_scaffold_246_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23447..24847
DNA (1401bp) protein (467aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000255|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00041}; Short=CysRS {ECO:0000255|HAMAP-Rul
Cysteine--tRNA ligase n=2 Tax=Clostridium perfringens RepID=SYC_CLOP1 rbh
NECEvent2014_5_8_scaffold_246_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25074..25484
DNA (411bp) protein (137aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01
Mini-ribonuclease 3 n=2 Tax=Clostridium perfringens RepID=Q0TMM5_CLOP1
hypothetical protein
NECEvent2014_5_8_scaffold_246_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25500..26237
DNA (738bp) protein (246aa)
thyX; FAD-dependent thymidylate synthase (EC:2.1.1.148)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
Thymidylate synthase ThyX n=8 Tax=Clostridium perfringens RepID=THYX_CLOPE rbh
NECEvent2014_5_8_scaffold_246_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26260..27129
DNA (870bp) protein (290aa)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridium perfringens RepID=Q0TMM7_CLOP1 rbh
RNA methyltransferase
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EDT22930.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_5_8_scaffold_246_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27145..27654
DNA (510bp) protein (170aa)
Uncharacterized protein n=10 Tax=Clostridium perfringens RepID=H7CZC8_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT26021.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
Displaying items 1-30 of 33 in total

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