ggKbase home page

NECEvent2014_5_8_scaffold_475_15

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 6825..7364

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=11 Tax=Clostridium perfringens RepID=RL5_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 351
  • Evalue 6.90e-94
  • rbh
rplE; 50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 179.0
  • Bit_score: 349
  • Evalue 5.60e-94
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 179.0
  • Bit_score: 349
  • Evalue 2.80e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 540
GTGAATAGACTTCAAGAAAGATATGAAAAAGAAGTAGTTCCAGCTATGATGGAAAAGTTCGGATACAAAAACATAATGCAAGTTCCTAAAATAGAAAAAGTTGTTATAAACATGGGAGTAGGAGAAGCTAAAGATAATCCTAAGGTTCTAGAATCAGCTGTTAGTGATTTACAAATAATCGCTGGACAAAAGCCTGTATTAACAAGAGCTAAAAAGTCAGTTGCTAACTTTAAAATAAGAGAGAACATGGCTTTAGGATGTAAAGTTACTTTAAGAAAGACTAATATGTACGAATTCGTAGATAAATTAGTTTCAATAGCTTTACCAAGAGTAAGAGACTTCAGAGGAGTTTCAGCTAAAGCATTTGATGGAAGAGGAAACTACTCATTAGGAATTAAGGAACAATTAATATTCCCAGAAATCGAGTATGATAAAGTAGATAAAGTAAGAGGAATGGATATAATCTTCGTTACTAGTGCTAACACAGACGAAGAAGCAAGAGAATTATTAAGATTCCTTGGAATGCCATTCGCTCAATAA
PROTEIN sequence
Length: 180
VNRLQERYEKEVVPAMMEKFGYKNIMQVPKIEKVVINMGVGEAKDNPKVLESAVSDLQIIAGQKPVLTRAKKSVANFKIRENMALGCKVTLRKTNMYEFVDKLVSIALPRVRDFRGVSAKAFDGRGNYSLGIKEQLIFPEIEYDKVDKVRGMDIIFVTSANTDEEARELLRFLGMPFAQ*