ggKbase home page

NECEvent2014_5_8_scaffold_1462_5

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 2509..3828

Top 3 Functional Annotations

Value Algorithm Source
Substrate-binding protein MsmE n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUH9_CLOPS similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 439.0
  • Bit_score: 908
  • Evalue 2.10e-261
  • rbh
ABC transporter periplasmic substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 439.0
  • Bit_score: 907
  • Evalue 1.70e-261
Substrate-binding protein MsmE {ECO:0000313|EMBL:ABG85641.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 439.0
  • Bit_score: 907
  • Evalue 8.60e-261

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1320
GTGAAGAAATTTTATGGTTTTGTTTTACTAATATTTTGTTTTAATCTTTTTGGATGTTCTTTTAGAAATACAGAAGTATCAAATAAAAATATTCAAGGATATGACAAAGGCGAGGAGCTTATAACAATGTGGGTTCATGTTATAGAAGAAACTTCAGAAGGACAAGCTTATAAAAATTCAGTAGAAAGGTTTAATAAAGAATACAATGGTAAGTATTGTTTAAGTGTTGAATTTGTACCTCGTAATGAAAGTGGAGGAGGATATACTGATAAAATAAATTCATCAGTAATTTCTGGAGGACTTCCAGACATAATAACTGTTGATGGGCCCAATGTATCAGCTTATGTTGCAAACAACATAATTCAGCCTTTAGTAGGTATAACTGATGATGAAAAGGCTAAATATTTACCGTCAGTAATAGAGCAAGGAACAATAAACAATAAATTATATGCATTAGGTCTAATGGAATCTAGTACGTTATTTTATTATAACAAAGATATATTAAACGAAGTAGGAATACAAGTACCATCATTTGATAATCCATGGACTTGGGACGAATTAAATAAGGTCTGTGAAAAAGTTAAGAACTATTTAGATAAAAAAAATGGATATCCAATAGATATGTCATTCCCAGCAGGGGAAACAACTATTTATTTTTATGCACCATTTATATGGTCAAATGGTGGAGATTTTGTAAGCTCTGATGGTTTAAAGGTTAATGGAGTATTTAATTCTGAAAAAAATGTAGAAACTATTAGTTATTTTAAAGAAATTACAGACAAAGGATATATACCTAAATATACAATAAGTGATTTATTTGAAAAGGGAAGAGCTGCATTTAAATTTGATGGAGCATGGGCTATTACAAATATAAGAAATAACTATCCAGATTTTAATTTAGGAATAGCACCATATCCAGTGGGAAATGATTGGAATGGAGAAAAGTATACACCAACAGGAGGATGGGCTTTTGCAACAACTACAACTTGTAAAAACCCTGAGGCTGCAAAAGAAGCAATCAAGTTTTTAACTAATGCAGAAAGTGGCATAGATATGTATAACTTAACAGGTAATTTACCATCTACATTTGAAGCTTATGAAAATATTGATGCATTTAAAACTGATGAATTATTTAAAACAGCATATTATCAGCTTGTTAACTATGGTCATCCAAGACCAAAATCACCAGCTTATCCTCAGATAAGTACATCATATCAGCAGGCTATTGAAGGTGTACTATTAAATGATGAAACACCAGAAGAATCGTTATATAAAACAATGAGAAGAATAGAAGATAAGTTAATACGTTATCAAGATTAA
PROTEIN sequence
Length: 440
VKKFYGFVLLIFCFNLFGCSFRNTEVSNKNIQGYDKGEELITMWVHVIEETSEGQAYKNSVERFNKEYNGKYCLSVEFVPRNESGGGYTDKINSSVISGGLPDIITVDGPNVSAYVANNIIQPLVGITDDEKAKYLPSVIEQGTINNKLYALGLMESSTLFYYNKDILNEVGIQVPSFDNPWTWDELNKVCEKVKNYLDKKNGYPIDMSFPAGETTIYFYAPFIWSNGGDFVSSDGLKVNGVFNSEKNVETISYFKEITDKGYIPKYTISDLFEKGRAAFKFDGAWAITNIRNNYPDFNLGIAPYPVGNDWNGEKYTPTGGWAFATTTTCKNPEAAKEAIKFLTNAESGIDMYNLTGNLPSTFEAYENIDAFKTDELFKTAYYQLVNYGHPRPKSPAYPQISTSYQQAIEGVLLNDETPEESLYKTMRRIEDKLIRYQD*