ggKbase home page

NECEvent2014_5_8_scaffold_1739_4

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(4199..4741)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BM52_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 180.0
  • Bit_score: 346
  • Evalue 1.70e-92
  • rbh
DNA-binding protein {ECO:0000313|EMBL:EDS79160.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495. similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 180.0
  • Bit_score: 346
  • Evalue 2.40e-92
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 180.0
  • Bit_score: 333
  • Evalue 4.20e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 543
ATGTTTATTGGTTATAGGCTACAAAAATTGCGAAAGAAAAGAAAATTAACTCAAAAGGCTTTAGCTGAAATGACAGGTATATCTCGTTCTTATCTCTCAGATATAGAACATAACAGGTATAACCCTAGCTTTGATACTATTGAGGCATTAGCCACAGCTCTAAAGCTTGATTTAAAATCATTTTTTGATGATACTCTCTTAGAAGAAGATTATTATCTAAAACCTCTAAGTGAGGAGCTAGAAGATGAAAGCTTTGAAGAAATTGAGGTGCTTTCTGAAAATGAGATTGTTGAAAAGCAAATAATTAATAATGATTTAAACATTACTTATAAAACTGGCTCTCTTTCAAAAAAGGAAATATTAAATATTAAAGCAGATTTAGAGAAAACTCTAAATAACTTAGATAATTTTGAAAAGAATATAGCCTTTGAGGGATTCCTACTAGATAGTGAAACAAGAAAGGCTTTTAAGGAAAGCTTAGAACATTCAATGAAAATGGCAAAACTAATTGCCAAAAACAAATTTTCTTCTAAAGCAAATTAG
PROTEIN sequence
Length: 181
MFIGYRLQKLRKKRKLTQKALAEMTGISRSYLSDIEHNRYNPSFDTIEALATALKLDLKSFFDDTLLEEDYYLKPLSEELEDESFEEIEVLSENEIVEKQIINNDLNITYKTGSLSKKEILNIKADLEKTLNNLDNFEKNIAFEGFLLDSETRKAFKESLEHSMKMAKLIAKNKFSSKAN*