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NECEvent2014_5_8_scaffold_3468_2

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(353..685)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR family n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT89_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 110.0
  • Bit_score: 223
  • Evalue 1.30e-55
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 110.0
  • Bit_score: 222
  • Evalue 8.30e-56
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDT24132.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 110.0
  • Bit_score: 219
  • Evalue 2.10e-54

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 333
TTGGAACTTAATAAAGAGATTATAAAAGGACATGTGGAAAGTATAATATTATCACTTTTACAAGGAAAAGATTTATATGGGTATGAGATTTCAAAATTAATTAGAGAAAACAGTAAAGAAGCCTTTGAGGTCAAGGATGGAACCTTATATGTTGTTTTAAAAAGGTTAGAAAAATTAGGACTTGTAATATCATACTGGGGTGATTGTAAAAGTGGTGGTGGAAGAAGGAAATATTTTAAAATTACAGAGGATGGAGTTAATTATCTAAAAGAAAAAAAGAGTGAATGGGAATTTCTAAAGAGTATTATGAATATTTTTTTGGGGGGAGAATAA
PROTEIN sequence
Length: 111
LELNKEIIKGHVESIILSLLQGKDLYGYEISKLIRENSKEAFEVKDGTLYVVLKRLEKLGLVISYWGDCKSGGGRRKYFKITEDGVNYLKEKKSEWEFLKSIMNIFLGGE*