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NECEvent2014_5_8_scaffold_2859_1

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(1..1467)

Top 3 Functional Annotations

Value Algorithm Source
HMG-I and HMG-Y, DNA-binding n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7I7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 489.0
  • Bit_score: 631
  • Evalue 7.20e-178
  • rbh
HMG-I and HMG-Y, DNA-binding {ECO:0000313|EMBL:EHJ02376.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 489.0
  • Bit_score: 630
  • Evalue 2.20e-177
Mu transposase/integrase similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 497.0
  • Bit_score: 523
  • Evalue 7.80e-146

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Taxonomy

Clostridium sp. DL-VIII → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1467
TTGCTTAGATTAAATGATTTGTTGAGGTGGAAGTTAGAAGATAATAGATTGGAAAGAGTACTTTGGATTGGAATTAAAGAAAATGTTGTAGTATGCATTAATATTAGAGAATTTATTATGCCTGTCTTATATAACTTAGAAAGTATAGGTGAAAGAATAAAAGATAAAGAAGTAGTAGTTGAGAGAAGTGACATTTCTTATAAGATATTAAAGGAAGAAGAGATTCCTAATTTATATAAAAATTATAGGGATAAAGCATGGAATATAATTAGTGATTTAGTTAGCAAAAATGAACCATTGATATATTATCCTAATTATAGGAGAGAGTTAGTATTAAAATGTGTGAAAGAAACTAATGTTAGTGAGAGTACAATTAATAGGTATTTAAAAAAGTATTGGATAGGTGGAAAGTGTATAAATGCTTTAATACCTAATTACAACTTATGTGGAGGAAAAGGAAAAGATAAGGCTACTAAAGAAAATGGATTAAAAAGGGGGAGACCTAGAAATAATAGAGATTTAATTGGAGATGGAATAAATATAAATGAAGATATTAAGAAAATATTTAATACGGCAATAAATAAGTATTATAAGAATAGTAATAAACTAACTTTAAGAATAACTTATGAAATGATGATTAAAGAGTATTTCAGAGATGAAGAGAACAATTCATTGATATTAGATTATAATAGAATTCCAACTTTGGCTCAGTTTAAATATTGGTTTTATAAGAAACGAGATTATAAGGATGAAATCACTAAAAGGTATGGAAGTAAGACATATGAGCAAAGGTATAGACCTGTTTTAGGTAAAAGCATGGAAGAAGTTTTTGCTCCAGGATCATTATATCAAATTGATGCAACAGTAGCAGATGTTTATGTAGTAAGTGAATTTAATAGAGGGTGGATAATAGGTAGACCAGTGCTGTACATTATATTAGATACTTTTAGTAGGATGATAGTAGGATTTTATGTTGGGCTAGAAGGACCAAGTTATATGGGAGCAGCAATGGCGATATCAACATTGGTAAAAGATAAAGTAGAGTTATGTAAGGAATATGGAGTTGAAATAAAGGATTATGAATGGGATACATGTGGGTTGCCAAAGAGTATTATTGCTGATAGAGGAGAAATGGAAGGAAAGAACATTGAGGAATTAGTTAAAGCATTAGGTGTAACTATAAAGATAACCCCACCGTTTAGAGCAGATTGGAAAGGCTGTGTAGAACAAAATTTTAGATTGATAAATCTTAAGACAAAGCCATTTCTGCCGGGAAAGGTTGACTGTAATTTTAGAGAGCGAGGGGATAAAGATTATAGGTTAGATGCTAAGTTAACACTTAAGGAATTTACAGCAATAATAATAAAGACTATATTGTATCATAATAATAAACATGTGATGAAAGAATATGATAGGAATCAATATCAGATAGATGATGATATAAGCCCAATTCCTAGAGAAATATGG
PROTEIN sequence
Length: 489
LLRLNDLLRWKLEDNRLERVLWIGIKENVVVCINIREFIMPVLYNLESIGERIKDKEVVVERSDISYKILKEEEIPNLYKNYRDKAWNIISDLVSKNEPLIYYPNYRRELVLKCVKETNVSESTINRYLKKYWIGGKCINALIPNYNLCGGKGKDKATKENGLKRGRPRNNRDLIGDGININEDIKKIFNTAINKYYKNSNKLTLRITYEMMIKEYFRDEENNSLILDYNRIPTLAQFKYWFYKKRDYKDEITKRYGSKTYEQRYRPVLGKSMEEVFAPGSLYQIDATVADVYVVSEFNRGWIIGRPVLYIILDTFSRMIVGFYVGLEGPSYMGAAMAISTLVKDKVELCKEYGVEIKDYEWDTCGLPKSIIADRGEMEGKNIEELVKALGVTIKITPPFRADWKGCVEQNFRLINLKTKPFLPGKVDCNFRERGDKDYRLDAKLTLKEFTAIIIKTILYHNNKHVMKEYDRNQYQIDDDISPIPREIW