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NECEvent2014_5_8_scaffold_4267_1

Organism: NECEvent2014_5_8_Clostridium_perfringens_28_7

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 2..589

Top 3 Functional Annotations

Value Algorithm Source
HMG-I and HMG-Y, DNA-binding n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7I7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 190.0
  • Bit_score: 205
  • Evalue 3.90e-50
HMG-I and HMG-Y, DNA-binding {ECO:0000313|EMBL:EHJ02376.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 190.0
  • Bit_score: 205
  • Evalue 5.50e-50
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 202.0
  • Bit_score: 182
  • Evalue 1.30e-43

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Taxonomy

Clostridium sp. DL-VIII → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 588
CTTATGCCTGTAAGTACAGCAACAGTAACGAGTAAAGGAATAAAATTTAAAGGAGTGTATTATTCTTCAGATATAGCAATTAAAGAGGGATGGTTTATAAAAGCACGAAATAGTGGCTCTTGGAAAATTAAGATTTCATACGACGTGAGGAAAATGGATTTTATTTATATAAAGGATGTAAATGGTATAGATTTTATAAAATGCTTTCTATTATCACACCAGAGTAAATATATTGGCAAATCTATTTATGATGTTGAATATTTAAATAATAAGGAGAAGATGGATTCTGATTTAATTAAAAGTCACAGTCTACAAGCAAGTATAGATTTGATAGAGGATATCGAAAAAATCGTTAATGATTCTAAAAAGAAGATACAATTTATTAACAATAGTAAAAATAAAAGAATAAATGGAATAGATGAAAATAGAAGAATTGAAAAGATTATTAATAGGAAACGTGAAGGTTTTGAAATAGGAGAAAAAGTAGAATTTACTACAAATACAGATAAATCTGATTTAAAAGAGTTTAATGATAGTGTTTGGGATGAGATATTAAGAGTAAAGAAAAATTTGGGAAAGGGAAAATAG
PROTEIN sequence
Length: 196
LMPVSTATVTSKGIKFKGVYYSSDIAIKEGWFIKARNSGSWKIKISYDVRKMDFIYIKDVNGIDFIKCFLLSHQSKYIGKSIYDVEYLNNKEKMDSDLIKSHSLQASIDLIEDIEKIVNDSKKKIQFINNSKNKRINGIDENRRIEKIINRKREGFEIGEKVEFTTNTDKSDLKEFNDSVWDEILRVKKNLGKGK*