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cg1_0.2A_scaffold_1140_5

Organism: CG1_02A_Bin11

partial RP 38 / 55 BSCG 36 / 51 MC: 2 ASCG 8 / 38
Location: 3524..5062

Top 3 Functional Annotations

Value Algorithm Source
rpoD3; RNA polymerase factor sigma-70 RpoD (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 351.0
  • Bit_score: 371
  • Evalue 3.90e-100
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=124054 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 513.0
  • Bit_score: 884
  • Evalue 6.40e-254
  • rbh
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=ACD78 similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 512.0
  • Bit_score: 866
  • Evalue 1.90e-248

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Taxonomy

ACD78 → Gracilibacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGTCAAAAAAGGATTCTAAAAAAGATGTAAGTCACATAGAAGAGATAGATCTTAATACTCTTATCGGTGGTGATGTGATTTTTGATCTCGGAAAAATTCGAGAAAAGGTGATTTCTTCAAAAGAAATAACTGCTATTCCCGTAAAAAAAGAGGTTACACATGATGATAAAGAAGATGATCATTCTCATGATGATATACATATTGATGAGGATGAAGATGAGGTTATTGTTGTAGAAGACGACATACTTCCACTTAAAGATGAAGATTTAATTCTCTTGGAAGATGATCTTATAGATTTTGAAGATGAAGATGAAGATGAAGAAGATGAAGATGAGGATGAAGATGAATGAACAGGAAGAAAAAAACGAGAACGATGACTTAAAAAAGTACCCATCGATCGAAGCGCCGACAAAAGACGAGTCGGAAAAGGACTTCAGAAATTCATCGATATTTCCGTACCTGCAGAGTTGCTCGAAGGACTTTCTGAAAATCTTCAACTCCTTATAAAAAAAGGAAAGGTGGAAGGGAAAATCACCTATGATGAGCTTCTTGCTGCTATGCCCCATGCAGAAGATGATGTCGATAAGCTCGATGAAATCTATACACGTCTTATGAAACTTAATATCGAAATTGTCGACAGTTTCGATAAAGATGAAATATTTAAACCAGGTCATACGAGTGAAGAAAAAGCTCAAGAAATAGATCTTTCTGATATTTCAGATGATTCCATTAGAATGTATCTAAATGAGATTGGACGATTCCATCTCATCGATGCTGAAGAAGAGGTACGTCTCGGTCGTCTCATCAAGAAAGGTTCACAGGACGCTCGAAAGAAACTTGCCGAAGCGAATCTCCGTCTCGTTGTAAGTATTGCAAAAAAATATATGGGGCGTGGTCTCGGACTTCTTGACCTTATTCAAGAATGAAATGTTGGTTTATTCCGTGCGGTAGATAAATTTGACCCGGAAAAGGGATTCAAATTCTCTACTTATGCTACTTGGTGGATCCGACAATGAGTAACTCGAGCAATCGCCGATCAAGCTCGAACAATTCGTGTTCCGGTTCATATGGTAGAAACAATCAATCGTTTTACTCATACTTTCCGACGACTCACTCAAGAACTTGCTCGAGAACCTCTTATGGAGGAACTTGCTCTGGAACTCGATATGGACATCCGAAAAGTACGCCAGATTATGCGTATCTCCCAGGATATCCTCTCTCTCGATTCTCCTGTCGGAGGCGAGGAGGATACGACTCTTGGAGACTTTGTAGAAGATGATAAATATCTTACTCCGGACAAGGCTGCAAATCTTACACTTCTGAAAGAAAATCTCTATGAGATGCTCGATTTCCTTACTCCTCGCGAACGAAAGATTGTCATCATGCGTTTTGGGCTCGATGGAGGTGAGATTCATACGCTCGAAGAAGTCGGAAAAGAATTCTGAGTAACACGTGAACGTGTTCGTCAGATTGAAGCAAAAACTCTTGAAAAACTCAAGAGTCATCCCAGTGCTGATAAGATACGATTCTTTAATTAA
PROTEIN sequence
Length: 513
MSKKDSKKDVSHIEEIDLNTLIGGDVIFDLGKIREKVISSKEITAIPVKKEVTHDDKEDDHSHDDIHIDEDEDEVIVVEDDILPLKDEDLILLEDDLIDFEDEDEDEEDEDEDEDE*TGRKKRER*LKKVPIDRSADKRRVGKGLQKFIDISVPAELLEGLSENLQLLIKKGKVEGKITYDELLAAMPHAEDDVDKLDEIYTRLMKLNIEIVDSFDKDEIFKPGHTSEEKAQEIDLSDISDDSIRMYLNEIGRFHLIDAEEEVRLGRLIKKGSQDARKKLAEANLRLVVSIAKKYMGRGLGLLDLIQE*NVGLFRAVDKFDPEKGFKFSTYATWWIRQ*VTRAIADQARTIRVPVHMVETINRFTHTFRRLTQELAREPLMEELALELDMDIRKVRQIMRISQDILSLDSPVGGEEDTTLGDFVEDDKYLTPDKAANLTLLKENLYEMLDFLTPRERKIVIMRFGLDGGEIHTLEEVGKEF*VTRERVRQIEAKTLEKLKSHPSADKIRFFN*