ggKbase home page

SCGC_AAA011_L22_17_3

Organism: DUSEL4_archaeon_sp_SCGC_AAA011_L22

partial RP 32 / 55 MC: 2 BSCG 15 / 51 MC: 1 ASCG 0 / 38
Location: comp(1102..3057)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 664.0
  • Bit_score: 415
  • Evalue 4.00e-113
Ribosomal protein S12/S23 {ECO:0000313|EMBL:ABW01170.1}; TaxID=397948 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Caldivirga.;" source="Caldivirga maquilingensis UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 664.0
  • Bit_score: 415
  • Evalue 2.00e-112
Intein/homing endonuclease similarity jgi
DB: jgi
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldivirga maquilingensis → Caldivirga → Thermoproteales → Thermoprotei → Crenarchaeota → Archaea

Sequences

DNA sequence
Length: 1956
ATGGCAAATAAAGGCAGAGGATTAGGAGCAGGAAGAAAATTAAAATCAAGAAGAGCCAAGCTTAGACTGAACTCCCAAAAATACAAAAGGAAAAAATTTAATTTAAAAGCTAAATCAGACCCATTAAGGGGAGCATCTCAGGCAAAAGGCATTGTTCTTAGCAAGTTCCAAAGAGAAGCTAAACAGCCAAATTCAGCGATGAGGAAGTGCGTAACGCCAGATACTAAAATATTAGTTGAAGATTTTTCAATTTCTATTGGAGATTATTCTAAACTGTTGGATAAAAATATTTTATCGACTAATTGGGATAAGAAAAACATAGAGAATACAAAAACCATAAGATATATGAAATTTAATCCAAAGTTACAAAATGATAAGGTGTATGAAATAAAAACAAAGACAGGCAGAGTTATAAAAGCTACTTCTGACCATCCTTTTTATACAAAAAAAGGAGTTTTAGAATCTTCTGCTTTAAATATCGGAGATAAATTGGCAGTATATCCTTATGATTCAGTGGAATATGAAGAGCCAAGTGATTTTATTTTGGTTGATATGAATAAGCTGGAGGAGAATTCACCAATTAACACAAAATTTTCCAAAATAAGAAAAGATCTAGAATTAAGGAGATTGTTGCCTCTAACCTCCAAGAACCCACATCTACCCAGATTGATAAGGCTTATGGCTCATTTATTCGGAGATGGGGGAATTTATCTGGATAAAGCTGATAATTCATTAAGATATAAGATAGTGTTTACTGGAAAAGTTGCTGAATTGGGGGAAATAAAAAAAGATTTAGAGAAACTTAATTTTAATATCTCCAAGATTATCAAATCAGAATCTGAAAGTATTGTAGAATCTGATAAAGGCTTTCAAAAAATAAAAGGCACTTCGTATCAGATGAGAATAACAAACAAAAGTTTAGCTCTTTTGTTTATTTCACTAGGGGTTCCTGTTGGTGATAAGGCATTGTCAGATTATGTAATCCCGCAATGGCTAAATAAAGTCCCTAACTGGATGAAAAAGGAATTTTTAAGGGGGTTTTTCGGCTCTGAATTGTCCAAGCCAAGAATAAGCAGAAATAGGAATCACACTACTACTATGCCTCCTGAATTTGCTATAAATAAATTAAACAGCATTAGTATTGATAATTTCTCAAATTCTTTTAGAAAACTGTTATCTTATTTTGATATAAGGATAACCAATATTATTTATGGAAAAAAGTTTTATAGAAAGGACGGCAATATTACCCAGCAGTATAGAATTTATCTATCCTCTGATTTTGAGTCTATAAAAAAACTTTATGGTAATATAGGCTTTGCTTATAGCAAAGAAAGAGATATTATGGCAAGATACTTGTATCAGTATACTCTATATAAAGAAAATATTATAAGAAAAAGAATAAATGCTTTTGAAAAAATAAAGGTCCTTGTTGCAAATGGTTCTAGTATTGTAAATGCAACAGAAGAGGTTGGTTTGGATGGATTAACTAGAGAATCTGTTGGTTATTGGTTGAGAAATAATTTACCCGCTGAAAAAATAAAAGTTCCTAATAATTATGTTATTCCTTTTGAAATTTGGCTAAAGAATTTCACAGAAAGACTAGATAATGGTTTTGTGTGGGATGAAATTGAATCTGTCGATGAAGTTTTTTGTGATGATGTTAGAGATATAACTACAGAATCTGGAAATCATAATTTTATTGCGAATGGTTTTTTAGTTTCTAATTGTGTCAGAGTACAACTGACCAAAAACGGAAGAAAGGTTGGTGCATTTGTCCCAGGAAATCTTGCCAGTAAATTTATAGATGAGCATGATGAGGTTATTATAGAGTGCATCGGCGGAAAACAGGGAAGAGCAAAGGGAGATATTTCCGGTATCAGATGGCAGGTAATAAAGGTCAATGACCAGAGCCTTAATGCTTTATGGAGAGGAAAAATAGAGAAGGGTAGAAGATGA
PROTEIN sequence
Length: 652
MANKGRGLGAGRKLKSRRAKLRLNSQKYKRKKFNLKAKSDPLRGASQAKGIVLSKFQREAKQPNSAMRKCVTPDTKILVEDFSISIGDYSKLLDKNILSTNWDKKNIENTKTIRYMKFNPKLQNDKVYEIKTKTGRVIKATSDHPFYTKKGVLESSALNIGDKLAVYPYDSVEYEEPSDFILVDMNKLEENSPINTKFSKIRKDLELRRLLPLTSKNPHLPRLIRLMAHLFGDGGIYLDKADNSLRYKIVFTGKVAELGEIKKDLEKLNFNISKIIKSESESIVESDKGFQKIKGTSYQMRITNKSLALLFISLGVPVGDKALSDYVIPQWLNKVPNWMKKEFLRGFFGSELSKPRISRNRNHTTTMPPEFAINKLNSISIDNFSNSFRKLLSYFDIRITNIIYGKKFYRKDGNITQQYRIYLSSDFESIKKLYGNIGFAYSKERDIMARYLYQYTLYKENIIRKRINAFEKIKVLVANGSSIVNATEEVGLDGLTRESVGYWLRNNLPAEKIKVPNNYVIPFEIWLKNFTERLDNGFVWDEIESVDEVFCDDVRDITTESGNHNFIANGFLVSNCVRVQLTKNGRKVGAFVPGNLASKFIDEHDEVIIECIGGKQGRAKGDISGIRWQVIKVNDQSLNALWRGKIEKGRR*