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UBA525

parkscprdpann_unknown_56_1
In projects: parkscprdpann  |  DPANN

Consensus taxonomy:

Metagenomic Context

Parent: parkscprdpann_UNK

Properties

Avg. coverage: 1.00 Longest contig: 122.31 Kbp Bin length: 1.36 Mbp GC content: 56.12 %
Contigs count: 35 Features count: 1596 rRNAs count: 0 tRNAs count: 41

Genome completeness

near complete RP 33 / 55 MC: 4 BSCG 21 / 51 MC: 2 ASCG 35 / 38 MC: 2
Displaying 35 items
contig # features sequence size GC content (%) Cov Coding Density (%)
UBA525contig_788 153 108580 bp 56.15 1.00 88.99
UBA525contig_168 139 122306 bp 56.97 1.00 91.03
UBA525contig_385 106 88474 bp 56.19 1.00 95.48
UBA525contig_115 102 70935 bp 56.29 1.00 88.34
UBA525contig_325
Domain: Archaea (50%)
96 83046 bp 56.35 1.00 92.67
UBA525contig_544 72 65038 bp 56.54 1.00 93.72
UBA525contig_373 67 70504 bp 56.59 1.00 90.54
UBA525contig_362 64 50321 bp 55.83 1.00 89.09
UBA525contig_469 60 64055 bp 56.55 1.00 94.69
UBA525contig_1814 57 51677 bp 56.32 1.00 87.67
UBA525contig_1903 56 48220 bp 55.63 1.00 91.51
UBA525contig_120 49 33795 bp 55.61 1.00 90.29
UBA525contig_274 47 36749 bp 56.89 1.00 94.26
UBA525contig_333 46 45011 bp 56.80 1.00 94.77
UBA525contig_431 46 34971 bp 56.16 1.00 85.56
UBA525contig_1881 45 34733 bp 55.11 1.00 92.27
UBA525contig_1178 38 29592 bp 56.58 1.00 91.37
UBA525contig_174 33 32499 bp 55.66 1.00 97.09
UBA525contig_2197 32 27663 bp 55.33 1.00 91.23
UBA525contig_833 31 32691 bp 56.37 1.00 89.35
UBA525contig_656 29 23955 bp 54.39 1.00 89.38
UBA525contig_627 29 28840 bp 55.99 1.00 92.52
UBA525contig_6360 27 23678 bp 54.33 1.00 91.97
UBA525contig_1476 26 24280 bp 54.69 1.00 79.56
UBA525contig_444
Domain: Archaea (54.55%)
22 15418 bp 56.52 1.00 91.16
UBA525contig_1537
Domain: Archaea (55.56%)
18 13256 bp 56.50 1.00 90.80
UBA525contig_410
Domain: Bacteria (55.56%)
18 18564 bp 56.44 1.00 96.61
UBA525contig_2686 15 13406 bp 55.26 1.00 91.35
UBA525contig_1573
Domain: Archaea (71.43%)
14 11760 bp 55.43 1.00 87.58
UBA525contig_380 12 12441 bp 52.75 1.00 93.48
UBA525contig_3318
Domain: Archaea (72.73%)
11 12370 bp 56.08 1.00 94.17
UBA525contig_2427 10 14054 bp 54.76 1.00 95.16
UBA525contig_869 9 5375 bp 53.92 1.00 85.51
UBA525contig_3536 9 6721 bp 57.86 1.00 95.25
UBA525contig_1431
Domain: Archaea (50%)
8 3178 bp 52.33 1.00 83.64
Displaying 35 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.