ggKbase home page

pig_EL5598_F7_scaffold_8028_2

Organism: pig_ID_EL5598_F7_Candidate_Lak_Phage-needs_Testing_26_31

RP 0 / 55 BSCG 0 / 51 ASCG 1 / 38
Location: comp(299..871)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) RepID=C0R0V4_BRAHW similarity UNIREF
DB: UNIREF100
  • Identity: 28.9
  • Coverage: 187.0
  • Bit_score: 76
  • Evalue 2.60e-11
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 29.2
  • Coverage: 192.0
  • Bit_score: 82
  • Evalue 8.00e-14
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=565034 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira hyodysenteriae (strain ATCC 49526 / WA1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.9
  • Coverage: 187.0
  • Bit_score: 76
  • Evalue 3.70e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brachyspira hyodysenteriae → Brachyspira → Brachyspirales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 573
ATGAAAGCAGCAGAAACATATGATCCTAGTACACCTGAAAAAAATGTTAAATTCGTATCATATGCTATTTGGCATATTCGTCGTGAAATTATGATGGCAGTTGATGAAGTTGGTGGACATATGGCAGTACCACGTAACATGGGTAGTATTGCTCGTGAAGCTGCTCGTGTAAAAGAACGTTTATATAATAAGAATGGTTATGAACCTGATATTGATGATATTTATAATGTATTAGTTAAGAAACATCCTAATTTAACTTATGATTCATTTGTATATACTATGAAAGCAAATGCTCGTGCAAATAGTTTAGATCAATCTGTTGGAGATGATGGAGATTCTAAAGTAACATTAGGCGATATGACATCAAACAATACATTTAAAGATCCAGACAGTTCTCTTAATAATGCAGATCTTGAACGTGAATTAGAAGATAATGTAAAGAGAATATTAGGTAAAAGAGATGGTGAAATTGTTTGCGCTTGTTACGGTATTAATGGAAGACCAGAAAAAAATAAATGGCAAGTTGCAGAAGAAAATGATATGACAGAAACACGTGTAAATCAGATTTTATAG
PROTEIN sequence
Length: 191
MKAAETYDPSTPEKNVKFVSYAIWHIRREIMMAVDEVGGHMAVPRNMGSIAREAARVKERLYNKNGYEPDIDDIYNVLVKKHPNLTYDSFVYTMKANARANSLDQSVGDDGDSKVTLGDMTSNNTFKDPDSSLNNADLERELEDNVKRILGKRDGEIVCACYGINGRPEKNKWQVAEENDMTETRVNQIL*