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bjp_ig2103_scaffold_63_curated

Search features with annotation key words

Displaying items 211-235 of 235 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2103_scaffold_63_curated_207
unknown

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247408..248013
DNA (606bp) protein (202aa)

This feature has no annotations

bjp_ig2103_scaffold_63_curated_208
unknown

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comp(248543..250342)
DNA (1800bp) protein (600aa)
Putative uncharacterized protein id=3012902 bin=GWC2_ACD39_50_8 species=Pseudomonas sp. GM41(2012) genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
tail fiber protein
bjp_ig2103_scaffold_63_curated_209
unknown

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comp(250585..251919)
DNA (1335bp) protein (445aa)
Glutamate dehydrogenase (NADP(+)) (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4] rbh
Glutamate dehydrogenase id=3544114 bin=GWC2_ACD39_50_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_63_curated_210

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comp(252041..253003)
DNA (963bp) protein (321aa)
bile acid:sodium symporter id=49066 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
Bile acid:sodium symporter {ECO:0000313|EMBL:EKD83416.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
bile acid:sodium symporter
bjp_ig2103_scaffold_63_curated_211
unknown

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comp(253025..254413)
DNA (1389bp) protein (463aa)
TPR repeat-containing protein id=49065 bin=ACD39 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
hypothetical protein
bjp_ig2103_scaffold_63_curated_212
unknown

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comp(254516..255634)
DNA (1119bp) protein (373aa)
Chaperone protein DnaJ id=3544093 bin=GWC2_ACD39_50_8 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
chaperone protein DnaJ; K03686 molecular chaperone DnaJ rbh
bjp_ig2103_scaffold_63_curated_213
unknown

Not on your lists

comp(255754..257610)
DNA (1857bp) protein (619aa)
Chaperone protein DnaK id=3544085 bin=GWC2_ACD39_50_8 species=unknown genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_ACD39_50_8 organism_group=ACD39
dnaK; chaperone protein DnaK; K04043 molecular chaperone DnaK rbh
bjp_ig2103_scaffold_63_curated_214
unknown

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comp(257640..258236)
DNA (597bp) protein (199aa)
Protein GrpE id=3544081 bin=GWC2_ACD39_50_8 species=Mitsuokella multacida genus=Mitsuokella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
heat-shock protein; K03687 molecular chaperone GrpE
bjp_ig2103_scaffold_63_curated_215
unknown

Not on your lists

comp(258269..259375)
DNA (1107bp) protein (369aa)
Heat-inducible transcription repressor HrcA id=3544079 bin=GWC2_ACD39_50_8 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
hrcA; heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor
bjp_ig2103_scaffold_63_curated_216
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(259431..261059)
DNA (1629bp) protein (543aa)
60 kDa chaperonin n=1 Tax=Clostridium sp. CAG:265 RepID=R6KMX0_9CLOT rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
chaperonin GroEL; K04077 chaperonin GroEL rbh
bjp_ig2103_scaffold_63_curated_217
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(261088..261378)
DNA (291bp) protein (97aa)
10 kDa chaperonin n=2 Tax=Chloroflexus RepID=A9WFA2_CHLAA
chaperonin Cpn10; K04078 chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
bjp_ig2103_scaffold_63_curated_218
Bacillus sp. JCM 19045, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(261466..263130)
DNA (1665bp) protein (555aa)
60 kDa chaperonin n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=CH60_HALOH rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1460639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. JCM 19045.;"
chaperonin GroEL; K04077 chaperonin GroEL rbh
bjp_ig2103_scaffold_63_curated_219

Not on your lists

comp(263191..263478)
DNA (288bp) protein (96aa)
molecular chaperone GroES n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI0003647442
Marine sediment metagenome DNA, contig: S01H4_C02336 {ECO:0000313|EMBL:GAG59977.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
co-chaperonin; K04078 chaperonin GroES
bjp_ig2103_scaffold_63_curated_220
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(263834..265369)
DNA (1536bp) protein (512aa)
AbgT putative transporter n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJL7_ALKMQ rbh
Aminobenzoyl-glutamate transport protein {ECO:0000313|EMBL:KAJ52502.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
AbgT transporter; K12942 aminobenzoyl-glutamate transport protein rbh
bjp_ig2103_scaffold_63_curated_221
unknown

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265517..265714
DNA (198bp) protein (66aa)
Transposase, IS4 family protein id=3094508 bin=GWC2_ACD39_50_8 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
bjp_ig2103_scaffold_63_curated_222
unknown

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265903..266262
DNA (360bp) protein (120aa)

This feature has no annotations

bjp_ig2103_scaffold_63_curated_223
unknown

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comp(266689..267237)
DNA (549bp) protein (183aa)

This feature has no annotations

bjp_ig2103_scaffold_63_curated_224
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(267441..267701)
DNA (261bp) protein (87aa)
Cro/Cl family transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037C88F1
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABA56700.1}; TaxID=323261 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
bjp_ig2103_scaffold_63_curated_225
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(267703..267984)
DNA (282bp) protein (94aa)
Addiction module toxin n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XGB8_METNJ
addiction module toxin
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI83437.1}; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM; 25689 / JAM1).;"
bjp_ig2103_scaffold_63_curated_226
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(268115..269080)
DNA (966bp) protein (322aa)
Alpha/beta hydrolase fold protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M204_GEODF
alpha/beta hydrolase
Hydrolase or acyltransferase, alpha/beta fold family {ECO:0000313|EMBL:ACM19300.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
bjp_ig2103_scaffold_63_curated_227
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(269560..269793)
DNA (234bp) protein (78aa)
Addiction module component, TIGR02574 family n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQY9_DESBD
addiction module protein
Addiction module component, TIGR02574 family {ECO:0000313|EMBL:ACU89218.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
bjp_ig2103_scaffold_63_curated_228
unknown

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comp(269958..270230)
DNA (273bp) protein (91aa)
hypothetical protein id=32325 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein
bjp_ig2103_scaffold_63_curated_229
unknown

Not on your lists

comp(270205..270537)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CLA5_9BACT
hypothetical protein; K09803 hypothetical protein
bjp_ig2103_scaffold_63_curated_230
unknown

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comp(270758..271027)
DNA (270bp) protein (90aa)
HTH-type transcriptional regulator id=1928394 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hTh-type transcriptional regulator
bjp_ig2103_scaffold_63_curated_231
unknown

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comp(271036..271308)
DNA (273bp) protein (91aa)
Putative uncharacterized protein id=1908272 bin=GWA2_OP3_52_12 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
addiction module toxin
Displaying items 211-235 of 235 in total

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