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bjp_ig2103_scaffold_191_curated_63

Organism: BJP_Ig2103_Hor_218_2014_ACD39_50_23_curated

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: comp(73635..74210)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily protein id=4744825 bin=GWC2_ACD39_50_8 species=Corynebacterium amycolatum genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39 similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 192.0
  • Bit_score: 379
  • Evalue 1.50e-102
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 177.0
  • Bit_score: 97
  • Evalue 3.50e-18
similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 192.0
  • Bit_score: 379
  • Evalue 3.00e-102

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 576
ATGAAGATGACCCCTGAAGAACTCTGGAAACTGGCCATACGCGGCGATCAACCGTCGTGGCAAAAGCTCTACGAGTTATTTGGCGGACCGGTTTATCAGTTCTTTCTCAGAAATACCAGAAACGTCGAGATGGCTGCCGACAAAACCCAGGAAGTCTTTCTACGCATCTTCAGAAGCCGCGAGGCCTTTGGCGGCGGATCGCTGAAAAGCTGGATCTTCCGCATCGCGCGCAACCTGCTGATTGACGAGTGGCGCCGTGCCGGGCACCGTGAAGTTCTTTCCGATAATCTGCCCGAAATCGCCGACACCGCTACCGGGGTTGAAGAAGAAGTAATCAACGCGATAGAACACGCGCAGATGAAGGAAATGATCGATGAGTGTCTCGAACTTCTCGACGAAGACAGTCGAATGACGGTCTGTCTGGTATACCTGGCCGGCTTGAGCATACCCGAGCTGGCCAGCGTAATGGAAATGCCTCTGGGCACCGCAAAAACGCGGGTGCGCCAGGCACGACTCAAGCTCGACGCCATGTTATGCGAAAAAATGCAGATTAAAAGGGTAGAACAGGGCCTATGA
PROTEIN sequence
Length: 192
MKMTPEELWKLAIRGDQPSWQKLYELFGGPVYQFFLRNTRNVEMAADKTQEVFLRIFRSREAFGGGSLKSWIFRIARNLLIDEWRRAGHREVLSDNLPEIADTATGVEEEVINAIEHAQMKEMIDECLELLDEDSRMTVCLVYLAGLSIPELASVMEMPLGTAKTRVRQARLKLDAMLCEKMQIKRVEQGL*