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bjp_ig2103_scaffold_33_curated_126

Organism: BJP_Ig2103_Hor_218_2014_ACD39_50_23_curated

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: 130462..131013

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=4328920 bin=GWC2_ACD39_50_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_ACD39_50_8 organism_group=ACD39 similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 183.0
  • Bit_score: 296
  • Evalue 2.10e-77
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 185.0
  • Bit_score: 133
  • Evalue 5.60e-29
similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 183.0
  • Bit_score: 296
  • Evalue 4.20e-77

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 552
ATGCTTCAATTTCAACAGGGAGATGAAGCCAGCTTTCGGACCCTCGTCGACAGATATAAGCAGAGAATTTACGCGTTTACTTATCGATTCCTCAATCGAAGCCCGGAAGCTGAAGATATCGCGCAGGAGGTTTTTGTGAAAGTATATTTCTCTCGCGATACCTACCGGCCTACCGCGAAGTTTTCGACCTGGGTTTATGTTATTTCGAAAAATGCCTGTCTGCAGGCGCTGAAAAAAATGGGCTCGAATGTTTCGATGAATGAGAGGCGTTCTGATACTGACCTGGAAATGGTCGAGACAATAGCCGGTTCTGGTGATGACAACCCTTCTGAGAGGCTTCTTAATGATGAGAAGTCCGGTCAGATAGCCGATGCGATCAGTCGTCTGCCAGAATCGCAGAAAATGGCCGTACTCTTGAAGCGTTATGATCAGATGAGTTACGAGGAAATGGCTGAAGTTATGAACTGCTCTGTTCAGTCGGTCAAGTCGCTGTTGTTCCGCGGCCGATCGGCTTTGAAAGAGTATCTGAAGGAGTATTTTCGCGAGGATTAA
PROTEIN sequence
Length: 184
MLQFQQGDEASFRTLVDRYKQRIYAFTYRFLNRSPEAEDIAQEVFVKVYFSRDTYRPTAKFSTWVYVISKNACLQALKKMGSNVSMNERRSDTDLEMVETIAGSGDDNPSERLLNDEKSGQIADAISRLPESQKMAVLLKRYDQMSYEEMAEVMNCSVQSVKSLLFRGRSALKEYLKEYFRED*