ggKbase home page

BSR_Lac_LFCR_na_at_22670_10

Organism: BSR_Lac_LFCR_na_at_Aminobacterium_colombiense_42_11

near complete RP 41 / 55 BSCG 46 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(11056..12027)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 323.0
  • Bit_score: 472
  • Evalue 3.00e-130
Pseudouridine synthase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5ED82_AMICL similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 323.0
  • Bit_score: 472
  • Evalue 2.20e-130
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 323.0
  • Bit_score: 472
  • Evalue 6.10e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Aminobacterium colombiense → Aminobacterium → Synergistales → Synergistia → Synergistetes → Bacteria

Sequences

DNA sequence
Length: 972
ATGTCTTATACCTTTACTGTTTCCGAGCATCATGACGGAAGAAGGTTGGATAAAGTCATTCGAACATTGTGGCCAACTCTTCCCCTTGGAGCAATGATGAAGGGAATTAGAAAAGGGCTTGTTCGAGTAGATGGGAAAAAGGTTGCGTGCTCTGTCCGTTTGGAGGAGGGACAATCTGTTTATGTCCCTTGGGAGAGGCCAGAAGAACATAATCATAGTTTCGCAATGCAAAAAAATGAAAAGAAAAAGACAACACAGAGAAGAATTCCCCTTGCTGTTGTTTATAAAGATCAATTTCTTATGGTTCTTAACAAAAGAGCTGGCCTTCTTGTTCAACCTGACGAAAGTGGAGAAGAGAGTCTTATTGAGCAGGTTTGGGCAGAAGTGCCTCCCGAAGAAGATTTTCGTGCCTGTGCCGTACATCGTCTTGATCGGAATACAACTGGTCTTGTTGTAGTGGCTCTTCATGGGCAGGCAGTGAGGGAGCTTCAAAGAGCTTTTAGGGATGATGATGTACGAAAAACATATTTAGTTGCAGTATATGGAAAAACGCCTCAGGAAGGAGATATTACATTGCCCTTGCTTAAAGATAGGGATAAAAATATTGTAAAAGTTGATCCTTCGGGGCAGGTGGCTCACACCCATTTTGAGAAGATAGCAGGAGATGACAAATATTCTCTTCTAAAGGTGCATTTATTGACGGGACGTTCTCACCAAATACGAGTGCATTTGGCCTCTTTGAATTACCCTGTCGTTGGCGATGTCAAATATGGAGCGTCTGCTGTCAATAAAGAATGGTATAGGCGAATCCACCTGAGTCACCCTCTTCTTCATGCTTGGTCCATTTCCTTTCATAATATGAAAGCACCTCTTGAGTATTTAGAGGGAAGAGTATTTCCTGCGGAGCCTGACAACCTTTTTTATAAGTTTTTGCAAATTAAGGGTTGGCAGAAATACTGCAAGGGGGTATAA
PROTEIN sequence
Length: 324
MSYTFTVSEHHDGRRLDKVIRTLWPTLPLGAMMKGIRKGLVRVDGKKVACSVRLEEGQSVYVPWERPEEHNHSFAMQKNEKKKTTQRRIPLAVVYKDQFLMVLNKRAGLLVQPDESGEESLIEQVWAEVPPEEDFRACAVHRLDRNTTGLVVVALHGQAVRELQRAFRDDDVRKTYLVAVYGKTPQEGDITLPLLKDRDKNIVKVDPSGQVAHTHFEKIAGDDKYSLLKVHLLTGRSHQIRVHLASLNYPVVGDVKYGASAVNKEWYRRIHLSHPLLHAWSISFHNMKAPLEYLEGRVFPAEPDNLFYKFLQIKGWQKYCKGV*